Difference between revisions of "FlyBase:Help"
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==Tools== | ==Tools== | ||
* [[FlyBase:Tools Overview|Tools Overview]] | * [[FlyBase:Tools Overview|Tools Overview]] | ||
| − | |||
| − | |||
* [[FlyBase:JBrowse|FlyBase JBrowse Help]] | * [[FlyBase:JBrowse|FlyBase JBrowse Help]] | ||
* [[FlyBase:JBrowse Tracks|JBrowse Tracks]] | * [[FlyBase:JBrowse Tracks|JBrowse Tracks]] | ||
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==External Resource Links== | ==External Resource Links== | ||
* [[FlyBase:External Resources|All External Resources]] | * [[FlyBase:External Resources|All External Resources]] | ||
| − | ** [[FlyBase:Drosophila Network Resources|Drosophila Online Resources]] | + | ** [[FlyBase:Drosophila Network Resources| Curated list of Drosophila Online Resources]] |
| − | ** [[FlyBase:Drosophila Material Resources|Drosophila Material Resources (Reagents)]] | + | ** [[FlyBase:Drosophila Material Resources|Curated list of Drosophila Material Resources (Reagents)]] |
** [[FlyBase:CRISPR|CRISPR links page]] | ** [[FlyBase:CRISPR|CRISPR links page]] | ||
| + | ** [[FlyBase:ScRNA-Seq|ScRNA-Seq links page]] | ||
| + | ** [[FlyBase:RNAi|RNAi links page]] | ||
** [[FlyBase:Stocks|Stocks links page]] | ** [[FlyBase:Stocks|Stocks links page]] | ||
| − | ** [[FlyBase: | + | ** [[FlyBase:Antibodies|Antibodies links page]] |
| + | ** [[FlyBase:Neuroscience|Neuroscience links page]] | ||
** [[FlyBase:Model Organism Databases|Model Organism Databases links page]] | ** [[FlyBase:Model Organism Databases|Model Organism Databases links page]] | ||
| − | |||
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** [[FlyBase:Images|Images links page]] | ** [[FlyBase:Images|Images links page]] | ||
** [[FlyBase:Maps|Maps links page]] | ** [[FlyBase:Maps|Maps links page]] | ||
** [http://www.flyrnai.org/tools/protocols/web/| DRSC Protocols page] | ** [http://www.flyrnai.org/tools/protocols/web/| DRSC Protocols page] | ||
| + | ** [[FlyBase:Papers with technical advances|Papers with technical advances links page]] | ||
| + | ** [[FlyBase:GSEA|Gene Set Enrichment Tools links page]] | ||
==Community== | ==Community== | ||
| + | * [[FlyBase:Drosophila Community Service Award| Drosophila Community Service Award]] | ||
* [http://flybase.org/submission/publication/ Fast Track Your Paper] | * [http://flybase.org/submission/publication/ Fast Track Your Paper] | ||
| + | * [[FlyBase:Fly Lab List| Fly Lab List]] | ||
* [[FlyBase:Community Advisory Group| FlyBase Community Advisory Group]] | * [[FlyBase:Community Advisory Group| FlyBase Community Advisory Group]] | ||
* [https://groups.google.com/forum/#!forum/flybase FlyBase Forum] | * [https://groups.google.com/forum/#!forum/flybase FlyBase Forum] | ||
| − | * [ | + | * [https://flybase.org/community/newsletter FlyBase Newsletter] |
* [http://www.bio.net/hypermail/dros/ bionet.dros] | * [http://www.bio.net/hypermail/dros/ bionet.dros] | ||
| − | * [https:// | + | * [[FlyBase:Fly Board| Fly Board]] |
| + | * [[FlyBase:NIH Funding| NIH Funding]] | ||
| + | * [https://flyslackco.slack.com/ FlySlack] | ||
* [[FlyBase:Gene_Snapshots| Gene Snapshots]] | * [[FlyBase:Gene_Snapshots| Gene Snapshots]] | ||
* [https://twitter.com/FlyBaseDotOrg Twitter (@FlyBaseDotOrg)] | * [https://twitter.com/FlyBaseDotOrg Twitter (@FlyBaseDotOrg)] | ||
| − | |||
==Species== | ==Species== | ||
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* [[FlyBase:About#Citing_FlyBase| Citing FlyBase]] | * [[FlyBase:About#Citing_FlyBase| Citing FlyBase]] | ||
* [[FlyBase:About#FlyBase_Consortium| FlyBase Consortium]] | * [[FlyBase:About#FlyBase_Consortium| FlyBase Consortium]] | ||
| + | * [[FlyBase:Overview| FlyBase Overview]] | ||
* [[FlyBase:About#FlyBase_Publications| FlyBase Publications]] | * [[FlyBase:About#FlyBase_Publications| FlyBase Publications]] | ||
* [[FlyBase:About#FlyBase_Support| FlyBase Support]] | * [[FlyBase:About#FlyBase_Support| FlyBase Support]] | ||
| Line 117: | Line 122: | ||
[[Category:Help]] | [[Category:Help]] | ||
| + | |||
| + | |||
| + | ==Tools for Archived Instances of FlyBase== | ||
| + | |||
| + | |||
| + | |||
| + | {| class="wikitable" style="text-align: center; color: red; margin: auto;" | ||
| + | !colspan="1"|Warning | ||
| + | |- | ||
| + | |rowspan="1"|Information about GBrowse is only relevant to users of an [http://flybase.org/downloads/archivedata archived] instance of FlyBase earlier than FB2022_05. | ||
| + | For users working with the current release at [http://flybase.org/ flybase.org], please see our page about [[FlyBase:JBrowse]], the genome viewer that replaced GBrowse. | ||
| + | |} | ||
| + | |||
| + | * [[FlyBase:GBrowse|FlyBase GBrowse Help]] | ||
| + | * [[FlyBase:GBrowse Tracks|GBrowse Tracks]] | ||
Latest revision as of 17:44, 30 October 2024
FlyBase Help
FlyBase Help Index
Tools
- Tools Overview
- FlyBase JBrowse Help
- JBrowse Tracks
- Feature differences between JBrowse and GBrowse on FlyBase
Downloads
- Downloads Overview
- Precomputed data files for the current release
- Archived data files for recent releases
- Map conversion
- FTP site
External Resource Links
- All External Resources
- Curated list of Drosophila Online Resources
- Curated list of Drosophila Material Resources (Reagents)
- CRISPR links page
- ScRNA-Seq links page
- RNAi links page
- Stocks links page
- Antibodies links page
- Neuroscience links page
- Model Organism Databases links page
- Images links page
- Maps links page
- DRSC Protocols page
- Papers with technical advances links page
- Gene Set Enrichment Tools links page
Community
- Drosophila Community Service Award
- Fast Track Your Paper
- Fly Lab List
- FlyBase Community Advisory Group
- FlyBase Forum
- FlyBase Newsletter
- bionet.dros
- Fly Board
- NIH Funding
- FlySlack
- Gene Snapshots
- Twitter (@FlyBaseDotOrg)
Species
- Phylogeny
- Original 12 Sequenced Drosophila Species
- Synteny Table for Original 12 Sequenced Drosophila Species
- Color Illustrations of more than 100 Drosophila Species
- Abbreviations
About FlyBase
- Release Notes
- New in Release
- Release Schedule
- FlyBase Positions
- Citing FlyBase
- FlyBase Consortium
- FlyBase Overview
- FlyBase Publications
- FlyBase Support
- FlyBase Website Access Fee FAQ
Help
- Useful links if you are new to Flies
- FlyBase Tweetorials
- FlyBase Video Tutorials
- Field-by-field guides to FlyBase reports
- Controlled vocabularies used by FlyBase
- Author Guidelines
- Personal communications to FlyBase
- FlyBase pamphlets, powerpoints and posters
- Contact FlyBase
- Commonly used vectors and constructs
- FAQs
FlyBase Report Help
FlyBase Report Help and Documentation
Documentation
Nomenclature
Gene Model Annotation
- Gene Model Annotation Guidelines (2012)
- Gene Model Annotation Guidelines (2007)
- What does the annotation evidence score mean?
GO Annotation
Computed Fields
Links to and from FlyBase
General
Tools for Archived Instances of FlyBase
| Warning |
|---|
| Information about GBrowse is only relevant to users of an archived instance of FlyBase earlier than FB2022_05.
For users working with the current release at flybase.org, please see our page about FlyBase:JBrowse, the genome viewer that replaced GBrowse. |