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...ever the symbol is used throughout FlyBase. For D.melanogaster clones, the species prefix is only displayed in the GENERAL INFORMATION section at the top of a ...insert originates from, with the initial letter of the genus and the full species name listed.

...gene that is derived from a species outside the family Drosophilidae, but has been analysed in Drosophila), the relevant SO term - e.g. engineered_foreig *if a SO term which describes what type of molecule the gene encodes has been assigned to the gene - e.g. miRNA_gene, tRNA_gene or protein_coding_ge

If an individual genotype variant chromosome has been reported to be usable as a balancer this is indicated by the presence ...sed throughout FlyBase. For D.melanogaster balancer/genotype variants, the species prefix is only displayed in the '''General Information''' section at the to

...f appropriate, include species within parentheses. Use full genus and full species for first mention; thereafter, initial for genus may be used.</li> <li> If appropriate, indicate sex after species (within the parentheses); separate by comma, space.</li>

...ignment, and gene predictions. Transcripts from other sequenced Drosophila species are based on NCBI Gnomon predictions. Transcripts described in the literatu ...ipt symbol is used throughout FlyBase. For D.melanogaster transcripts, the species prefix is only displayed in the '''General Information''' section at the to

...the gene symbol is used throughout FlyBase. For D.melanogaster genes, the species prefix is only displayed in the '''General Information''' section at the to ...ecific insertion exists, with the initial letter of the genus and the full species name listed.

...ion symbol is used throughout FlyBase. For D.melanogaster aberrations, the species prefix is only displayed in the '''General Information''' section at the to ...rration originates from, with the initial letter of the genus and the full species name listed.

...e species of the strain, with the initial letter of the genus and the full species name listed. ...or || style="width: 80%;" | Indicates whether whole genome or specific arm has been sequenced.

...ster''' matches' (i.e. FlyBase entries matching the query ID/symbol from a species other than ''D. melanogaster'') and whether to 'Match synonyms' (i.e. inclu 4. The resulting table has four sections:

...A segments. For each individual DNA segment a Recombinant Construct Report has also been created, containing data specific to that segment. ...rce species is indicated with the initial letter of the genus and the full species name. For example: [http://{{flybaseorg}}/reports/FBms0000567.html lacZ+3.3

|'''Species''' || all || The organism from which the biological material or data were d ...infection, parasitization, nutrition), or for microbiome studies, the host species.

== How can I submit a correction to the genomic sequences of a Drosophila species other than D. melanogaster? == ...he present time, the genomic sequences of the &quot;other&quot; Drosophila species (other than D. melanogaster) are static; there are no immediate plans to in

| '''Species''' || The species for which the Gene Group has been compiled. ...e the Gene Group. This section also clearly indicates that the Gene Group has been compiled manually by FlyBase curators.

...allele symbol is used throughout FlyBase. For D.melanogaster alleles, the species prefix is only displayed in the [[FlyBase:Allele Report#General Information ...allele originates from, with the initial letter of the genus and the full species name listed.

==Sibling Species Genomic Libraries== ...GP DGC, BDGP EST, BDGP ORF, iPCR(IP), Testis cDNA, CuraGen, and Drosophila Species ESTs/cDNAs. More information is available at [https://dgrc.bio.indiana.edu/

...ubmed/18567805 PMID:18567805]) is often used in cell culture. Each pathway has very different readout assays (i.e. specific phenotypes, gene expression, p | '''Species''' || The species for which the Pathway Gene Group has been compiled.

===Species Searched=== ...bs search data for all species included in FlyBase. An option to filter by species is provided in the resulting hit-list.

...as sequences that can be mapped to the reference sequence of a Drosophila species. FlyBase currently accepts linkout data in a simple spreadsheet table (see * Linkout data must be updated once a year. Linkout data that has not been updated in over a year will be dropped from FlyBase.

...as sequences that can be mapped to the reference sequence of a Drosophila species. FlyBase currently accepts linkout data in a simple spreadsheet table (see *Linkout data must be updated once a year. Linkout data that has not been updated in over a year will be dropped from FlyBase.

...of genetic and molecular data for ''D. melanogaster'' and other Drosophila species, targeted to an audience of research professionals. The resources listed he ...anchester.ac.uk/forthepublic/outreachresources Manchester Fly Facility]''' has a large compendium of Drosophila-related links for the public, educators, a

A note on ribozymes: FlyBase has a foreign ribozyme gene, symbol LTSV\RBZ. Alleles of LTSV\RBZ capture the d ...ed by the construct symbol used in the publication. If no construct symbol has been used, the string 'mIa' where 'm' stands for minigene, 'I' for the firs

A note on ribozymes: FlyBase has a foreign ribozyme gene, symbol LTSV\RBZ. Alleles of LTSV\RBZ capture the d ...ed by the construct symbol used in the publication. If no construct symbol has been used, the string 'mIa' where 'm' stands for minigene, 'I' for the firs

...ults in other Drosophila species, choose the species of interest from the “Species filter” drop down menu before you run the query). ...rch. The window returns to the QB query page, where the first QuerySegment has been populated with your chosen CV term.

...gation bar, which can be accessed from any FlyBase page, the homepage also has direct links to the most commonly used tools. ==Searching 12 species==

...rack Your Paper (FTYP) tool allows you to quickly indicate that your paper has no curatable data types or investigates no ''Drosophila melanogaster'' gene ...to Fast-Track our paper but when I go to the link it shows that the paper has been already curated. What should I do?

:computer files has a unique 7 digit identifier (an FBrf). Where this :Where a FlyBase gene has no full name (eg Pten), this field is left blank.

...ocess is whether a potential ORF shows a pattern of conservation among the species in the melanogaster subgroup. New annotations that are difficult to categor ...orted by the literature (including conservation patterns across Drosophila species), a non-ATG translation start site or a downstream ATG may be used; an expl

As well as including gene reports for genes derived from species within the family Drosophilidae, FlyBase also includes gene reports for non ...the gene symbol is used throughout FlyBase. For D.melanogaster genes, the species prefix is only displayed in the '''General Information''' section at the to

...rlier, data are available for each of the original 12 sequenced Drosophila species. For releases FB2018_06 to FB2020_02, data are available only for D. melano ...FTP genomes directory] or the current files for selected other Drosophila species.

Each year the FlyBoard has important information to share with the Drosophila community. This communic The [http://flybase.org/wiki/FlyBase:Fly_Board FlyBoard] has decided to add a new element that may increase the reach and sustainability

...Browse ([http://www.ncbi.nlm.nih.gov/pubmed/23376193 Stein 2013]). FlyBase has offered GBrowse2 since March 2013, primarily because of its ability to hand [[File:DataSource.png|200px|right|Choose your species.]]

...Base has provided an online repository of biological data about Drosophila species, focusing on the model organism D. melanogaster. Data in FlyBase are either ...nding nucleotide and protein sequences in Drosophila and dozens of related species

...s from all species, except ''D. melanogaster'', automatically get a unique species abbreviation prefix prepended to their FlyBase-approved symbol (see section ...symbols, exist for all molecularly defined gene models in the 12 sequenced species of Drosophila.

...cgi-bin/cvreport.pl?rel=is_a&id=SO:1000008 SO:1000008] A single nucleotide has been changed into another nucleotide. Location of mutation is indicated wit ...pl?rel=is_a&id=SO:0000109 SO:0000109] A region of sequence where variation has been observed. Often these refer to natural variants of a protein that lead

...ph maps of polytene chromosomes for the 12 originally sequenced Drosophila species:<br />[http://flybase.org/wiki/FlyBase:Maps FlyBase Maps] ...hila plasmids</b>: <br />[https://dnasu.org/DNASU/AdvancedSearchOptions.do?species=Drosophila%20melanogaster&psi=0 DNASU Plasmid Repository, Arizona State Uni

...n is unknown and the feature indicates a range within which the breakpoint has been mapped. ...d deficiencies cannot be placed on the genome map with certainty, the BDSC has defined segments of these deficiencies that fill gaps in molecularly define

...omplexation with diblock copolymers is a promising strategy for RNAi-based species-specific knock down of gene expression.||Effective delivery and selective i | The snRNA-seq dataset has been made publicly available at DRSC/TRiP Functional Genomics Resources dat

...ts at FlyBase are available through JBrowse; in some cases, modENCODE data has been combined with data from other non-modENCODE datasets. For RNA-seq data ...g GBrowse] -- <span style="color:red"> Warning: The GBrowse genome viewer has been updated to JBrowse, but techniques shown here are still useful in JBro