Difference between revisions of "FlyBase:FlyBase Help Index"
Jump to navigation
Jump to search
| Line 75: | Line 75: | ||
*[[FlyBase:Downloads Overview | Downloads Overview]] | *[[FlyBase:Downloads Overview | Downloads Overview]] | ||
| − | == '''Tools Documentation''' == | + | == '''Tools and Downloads Documentation''' == |
'''Tools Overview''' | '''Tools Overview''' | ||
| Line 108: | Line 108: | ||
*[http://beta.flybase.org/rnaseq/profile_search RNA-Seq Profile] | *[http://beta.flybase.org/rnaseq/profile_search RNA-Seq Profile] | ||
*[http://beta.flybase.org/rnaseq/simsearch RNA-Seq Similarity] | *[http://beta.flybase.org/rnaseq/simsearch RNA-Seq Similarity] | ||
| + | |||
| + | '''Downloads''' | ||
| + | *[[FlyBase:Downloads Overview | Downloads Overview]] | ||
== '''Author Help''' == | == '''Author Help''' == | ||
Revision as of 16:56, 8 December 2017
Video Tutorials
- FlyBase Video Tutorials on YouTube organized into four playlists.
Basic navigation series
- How to find all data related to a gene
- How to generate an excel file of all alleles of a gene
- Finding related genes in FlyBase: Gene Groups
- Finding related genes/alleles in FlyBase: Vocabularies
- Finding related genes in FlyBase: The Gene Ontology
- Gene Snapshots in FlyBase
- Finding genes with similar phenotypes
Tools series
- RNA-Seq Part I: Using GBrowse
- RNA-Seq Part II: Using RNA-Seq Profile Search
- RNA Seq Part III: Searching for Similarly Expressed Genes
- Finding related genes/alleles in FlyBase: Vocabularies
- Using the Orthology search tool
- Finding related genes in FlyBase: The Gene Ontology
- Finding genes with similar phenotypes
RNA-Seq series
- RNA-Seq Part I: Using GBrowse
- RNA-Seq Part II: Using RNA-Seq Profile Search
- RNA Seq Part III: Searching for Similarly Expressed Genes
FlyBase Guidelines
Data Documentation
Curation
- Controlled Vocabularies used by FlyBase
- Gene Model Annotation Guidelines
- Gene Ontology (GO) Annotation
- Nontraditional alleles
- Vectors and Constructs
Field by Field guides to FlyBase Reports
- All Reports
- Aberration Report
- Allele Report
- Balancer/Genotype variant Report
- Cell Line Report
- Clone Report
- Gene Report
- Human Disease Model Report
- Image Report
- Insertion Report
- Interaction Report
- Large Dataset Metadata Report
- Natural Transposon Report
- Person Report
- Polypeptide Report
- Recombinant Construct Report
- Reference Report
- Sequence Feature Report
- Strain Report
- Stock Report
- Transcript Report
- Vocabularies Term Report
Computed Fields
Downloads
Tools and Downloads Documentation
Tools Overview
Query Tools Help
Genomic/Map tools Help
- BLAST
- CytoSearch
- FeatureMapper
- FlyBase GBrowse Help
- GBrowse Tracks
- FlyBase JBrowse Help
- JBrowse Tracks
Retrieve/Convert Tools Help
- Batch Download
- Coordinate Converter
- ID Converter
- Sequence Downloader
RNA-Seq Tools Help
Downloads