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• FlyBase:Nontraditional alleles
  A note on ribozymes: FlyBase has a foreign ribozyme gene, symbol LTSV\RBZ. Alleles of LTSV\RBZ capture the d ...ed by the construct symbol used in the publication. If no construct symbol has been used, the string 'mIa' where 'm' stands for minigene, 'I' for the firs
  8 KB (1,454 words) - 06:54, 21 September 2015
• FlyBase:Curation of Genetic Data
  A note on ribozymes: FlyBase has a foreign ribozyme gene, symbol LTSV\RBZ. Alleles of LTSV\RBZ capture the d ...ed by the construct symbol used in the publication. If no construct symbol has been used, the string 'mIa' where 'm' stands for minigene, 'I' for the firs
  8 KB (1,402 words) - 19:04, 22 May 2013
• FlyBase:QueryBuilder Help
  ...ults in other Drosophila species, choose the species of interest from the “Species filter” drop down menu before you run the query). ...rch. The window returns to the QB query page, where the first QuerySegment has been populated with your chosen CV term.
  13 KB (2,107 words) - 22:40, 23 January 2018
• FlyBase:Tools Overview
  ...gation bar, which can be accessed from any FlyBase page, the homepage also has direct links to the most commonly used tools. ==Searching 12 species==
  37 KB (5,962 words) - 20:01, 29 March 2023
• FlyBase:FAQ
  ...rack Your Paper (FTYP) tool allows you to quickly indicate that your paper has no curatable data types or investigates no ''Drosophila melanogaster'' gene ...to Fast-Track our paper but when I go to the link it shows that the paper has been already curated. What should I do?
  67 KB (10,581 words) - 19:22, 7 May 2024
• FlyBase:Gene Ontology (GO) Annotation
  :computer files has a unique 7 digit identifier (an FBrf). Where this :Where a FlyBase gene has no full name (eg Pten), this field is left blank.
  17 KB (2,595 words) - 15:52, 28 September 2023
• FlyBase:Gene Model Annotation Guidelines
  ...ocess is whether a potential ORF shows a pattern of conservation among the species in the melanogaster subgroup. New annotations that are difficult to categor ...orted by the literature (including conservation patterns across Drosophila species), a non-ATG translation start site or a downstream ATG may be used; an expl
  39 KB (5,700 words) - 20:13, 29 March 2023
• FlyBase:Gene Report
  As well as including gene reports for genes derived from species within the family Drosophilidae, FlyBase also includes gene reports for non ...the gene symbol is used throughout FlyBase. For D.melanogaster genes, the species prefix is only displayed in the '''General Information''' section at the to
  78 KB (11,675 words) - 12:18, 17 January 2024
• FlyBase:Downloads Overview
  ...rlier, data are available for each of the original 12 sequenced Drosophila species. For releases FB2018_06 to FB2020_02, data are available only for D. melano ...FTP genomes directory] or the current files for selected other Drosophila species.
  85 KB (12,797 words) - 09:23, 1 May 2024
• FlyBase:Fly Board
  Each year the FlyBoard has important information to share with the Drosophila community. This communic The [http://flybase.org/wiki/FlyBase:Fly_Board FlyBoard] has decided to add a new element that may increase the reach and sustainability
  25 KB (3,560 words) - 15:05, 19 April 2024
• FlyBase:GBrowse Help
  ...Browse ([http://www.ncbi.nlm.nih.gov/pubmed/23376193 Stein 2013]). FlyBase has offered GBrowse2 since March 2013, primarily because of its ability to hand [[File:DataSource.png|200px|right|Choose your species.]]
  18 KB (2,893 words) - 17:46, 14 December 2022
• FlyBase:Overview
  ...Base has provided an online repository of biological data about Drosophila species, focusing on the model organism D. melanogaster. Data in FlyBase are either ...nding nucleotide and protein sequences in Drosophila and dozens of related species
  54 KB (8,096 words) - 21:41, 20 December 2022
• FlyBase:Nomenclature
  ...s from all species, except ''D. melanogaster'', automatically get a unique species abbreviation prefix prepended to their FlyBase-approved symbol (see section ...symbols, exist for all molecularly defined gene models in the 12 sequenced species of Drosophila.
  90 KB (13,861 words) - 06:53, 8 June 2021
• FlyBase:GBrowse Tracks
  ...cgi-bin/cvreport.pl?rel=is_a&id=SO:1000008 SO:1000008] A single nucleotide has been changed into another nucleotide. Location of mutation is indicated wit ...pl?rel=is_a&id=SO:0000109 SO:0000109] A region of sequence where variation has been observed. Often these refer to natural variants of a protein that lead
  44 KB (6,407 words) - 17:45, 14 December 2022
• FlyBase:Drosophila Online Resources
  ...ph maps of polytene chromosomes for the 12 originally sequenced Drosophila species:<br />[http://flybase.org/wiki/FlyBase:Maps FlyBase Maps] ...hila plasmids</b>: <br />[https://dnasu.org/DNASU/AdvancedSearchOptions.do?species=Drosophila%20melanogaster&psi=0 DNASU Plasmid Repository, Arizona State Uni
  65 KB (9,462 words) - 13:33, 19 March 2024
• FlyBase:JBrowse Tracks
  ...n is unknown and the feature indicates a range within which the breakpoint has been mapped. ...d deficiencies cannot be placed on the genome map with certainty, the BDSC has defined segments of these deficiencies that fill gaps in molecularly define
  61 KB (8,553 words) - 09:36, 22 February 2024
• FlyBase:Papers with technical advances
  ...omplexation with diblock copolymers is a promising strategy for RNAi-based species-specific knock down of gene expression.||Effective delivery and selective i | The snRNA-seq dataset has been made publicly available at DRSC/TRiP Functional Genomics Resources dat
  193 KB (25,070 words) - 10:00, 2 May 2024
• FlyBase:ModENCODE data at FlyBase
  ...ts at FlyBase are available through JBrowse; in some cases, modENCODE data has been combined with data from other non-modENCODE datasets. For RNA-seq data ...g GBrowse] -- <span style="color:red"> Warning: The GBrowse genome viewer has been updated to JBrowse, but techniques shown here are still useful in JBro
  338 KB (49,999 words) - 18:19, 25 May 2023

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