Difference between revisions of "FlyBase:Drosophila Online Resources"

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* DRSC, Drosophila RNAi Screening Center:<br />[http://www.flyrnai.org/index.html DRSC, Harvard Medical School, Boston, MA, USA]
 
* DRSC, Drosophila RNAi Screening Center:<br />[http://www.flyrnai.org/index.html DRSC, Harvard Medical School, Boston, MA, USA]
 
* DRSC, Fosmid rescue analysis tool for identification of fosmids appropriate for cross-species rescue of RNAi:<br />[http://www.flyrnai.org/cgi-bin/RNAi_find_rescue_compl.pl DRSC, Harvard Medical School, Boston, MA, USA]
 
* DRSC, Fosmid rescue analysis tool for identification of fosmids appropriate for cross-species rescue of RNAi:<br />[http://www.flyrnai.org/cgi-bin/RNAi_find_rescue_compl.pl DRSC, Harvard Medical School, Boston, MA, USA]
 +
* DRSC, Search by gene(s) to find hits in DRSC screens:<br /> [http://www.flyrnai.org/RNAi_find_hit_info.html DRSC, Harvard Medical School, Boston, MA, USA]
 
* GenomeRNAi, Heidelberg, a database of RNA interference (RNAi) screens in cultured Drosophila cells:<br />[http://www.dkfz.de/signaling2/rnai/index.php GenomeRNAi, DKFZ, Heidelberg, Germany]
 
* GenomeRNAi, Heidelberg, a database of RNA interference (RNAi) screens in cultured Drosophila cells:<br />[http://www.dkfz.de/signaling2/rnai/index.php GenomeRNAi, DKFZ, Heidelberg, Germany]
 
* GESS, off-target RNAi prediction:<br />[http://www.flyrnai.org/gess/ DRSC, Harvard Medical School, Boston, MA, USA]
 
* GESS, off-target RNAi prediction:<br />[http://www.flyrnai.org/gess/ DRSC, Harvard Medical School, Boston, MA, USA]

Revision as of 15:04, 8 July 2015

Atlases, Images and Videos

CRISPRs and TALENs

Data Repositories

Data and Metadata for Drosophila Genomes

Genome Sequencing Projects

Gene Expression Databases and Tools

General Bioinformatics Tools

Human Disease: Drosophila Models and Orthologous Genes

Interaction and Pathway Databases

miRNA and ncRNA Databases and Tools

NOTE - mirBase Release 21 (June 2014) uses old reference genome assemblies for D. melanogaster (Dmel_Release_5), D. simulans (Dsim_Release_1) and D. pseudoobscura (Dpse_Release_2). Linkouts from D. melanogaster miRNA genes to the Ensembl Genome browser (which displays Dmel_Release_6) will point to the old "Release_5" coordinates, which will be off the mark for many genes, especially those on X, 2R, 3R and 4 chromosomes.

Miscellaneous

Phylogenetic Comparison Tools

Population Biology and Polymorphism Resources

Protein Analysis

RNAi

Sequence Analysis

Taxonomy

Transcription Regulation Databases and Tools