Difference between revisions of "FlyBase:Drosophila Online Resources"

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* DGRC, Cell Line Expression tool (based on modENCODE data):<br />[https://dgrc.cgb.indiana.edu/cells/TilingSearch DGRC, University of Indiana, Bloomington, IN, USA]
 
* DGRC, Cell Line Expression tool (based on modENCODE data):<br />[https://dgrc.cgb.indiana.edu/cells/TilingSearch DGRC, University of Indiana, Bloomington, IN, USA]
 
* DRSC, Cell Line Expression tool (based on modENCODE data):<br />[http://www.flyrnai.org/cgi-bin/RNAi_expression_levels.pl DRSC, Harvard Medical School, Boston, MA, USA]
 
* DRSC, Cell Line Expression tool (based on modENCODE data):<br />[http://www.flyrnai.org/cgi-bin/RNAi_expression_levels.pl DRSC, Harvard Medical School, Boston, MA, USA]
* FlAnnotator, Annotation of Gene Expression:<br />[http://www.flyprot.org/index.php FlyAnnotator, University of Cambridge, UK]
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* FlyAnnotator, Annotation of Gene Expression:<br />[http://www.flyprot.org/index.php FlyAnnotator, University of Cambridge, UK]
 
* FlyAtlas2, for exploring how genes are expressed in the tissues of ''D. melanogaster'':<br />[http://flyatlas.gla.ac.uk/flyatlas/index.html FlyAtlas2, University of Glasgow, Glasgow, UK]
 
* FlyAtlas2, for exploring how genes are expressed in the tissues of ''D. melanogaster'':<br />[http://flyatlas.gla.ac.uk/flyatlas/index.html FlyAtlas2, University of Glasgow, Glasgow, UK]
 
* FlyEx, a Database of Segmentation Gene Expression in Drosophila:<br />[http://urchin.spbcas.ru/flyex/ FlyEx, St. Petersburg State Polytechnical University, Russia]
 
* FlyEx, a Database of Segmentation Gene Expression in Drosophila:<br />[http://urchin.spbcas.ru/flyex/ FlyEx, St. Petersburg State Polytechnical University, Russia]

Revision as of 14:59, 8 July 2015

Atlases, Images and Videos

CRISPRs and TALENs

Data Repositories

Data and Metadata for Drosophila Genomes

Genome Sequencing Projects

Gene Expression Databases and Tools

General Bioinformatics Tools

Human Disease: Drosophila Models and Orthologous Genes

Interaction and Pathway Databases

miRNA and ncRNA Databases and Tools

NOTE - mirBase Release 21 (June 2014) uses old reference genome assemblies for D. melanogaster (Dmel_Release_5), D. simulans (Dsim_Release_1) and D. pseudoobscura (Dpse_Release_2). Linkouts from D. melanogaster miRNA genes to the Ensembl Genome browser (which displays Dmel_Release_6) will point to the old "Release_5" coordinates, which will be off the mark for many genes, especially those on X, 2R, 3R and 4 chromosomes.

Miscellaneous

Phylogenetic Comparison Tools

Population Biology and Polymorphism Resources

Protein Analysis

RNAi

Sequence Analysis

Taxonomy

Transcription Regulation Databases and Tools