Difference between revisions of "FlyBase:Resources"
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| Line 10: | Line 10: | ||
| Apis mellifera | | Apis mellifera | ||
|- | |- | ||
| − | | | + | | [http://beetlebase.org/ BeetleBase] |
| − | | | + | | Red Flour Beetle |
| − | | | + | | Tribolium castaneum |
| + | |- | ||
| + | | [http://dictybase.org/ DictyBase] | ||
| + | | Soil Amoeba | ||
| + | | Dictyostelium discoideum | ||
| + | |- | ||
| + | | [http://ecocyc.org/ EcoCyc] | ||
| + | | Bacteria | ||
| + | | Escherichia coli | ||
| + | |- | ||
| + | | [http://www.gramene.org/ Gramene] | ||
| + | | Grasses | ||
| + | | | ||
| + | |- | ||
| + | | [http://www.informatics.jax.org/ MGI] | ||
| + | | Mouse | ||
| + | | Mus musculus | ||
| + | |- | ||
| + | | [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=OMIM/ OMIM] | ||
| + | | Human | ||
| + | | Homo sapiens | ||
| + | |- | ||
| + | | [http://www.yeastgenome.org// SGD] | ||
| + | | Budding Yeast | ||
| + | | Saccharomyces cerevisiae | ||
| + | |- | ||
| + | | [http://www.genedb.org/genedb/pombe/index.jsp S. pombe GeneDB] | ||
| + | | Fission Yeast | ||
| + | | Schizosaccharomyces pombe | ||
| + | |- | ||
| + | | [http://www.arabidopsis.org/ TAIR] | ||
| + | | Mouse-ear cress | ||
| + | | Arabidopsis thaliana | ||
| + | |- | ||
| + | | [http://www.vectorbase.org/index.php VectorBase] | ||
| + | | Mosquitos and Deer Tick | ||
| + | | Anopheles gambiae, Aedes aegypti, Culex pipiens quinquefasciatus, Ixodes scapularis | ||
| + | |- | ||
| + | | [http://www.wormbase.org/ WormBase] | ||
| + | | Round worms | ||
| + | | Caenorhabditis | ||
| + | |- | ||
| + | | [http://zfin.org/cgi-bin/webdriver?MIval=aa-ZDB_home.apg ZFIN] | ||
| + | | Zebrafish | ||
| + | | Danio rerio | ||
|} | |} | ||
| + | |||
=Related Projects= | =Related Projects= | ||
:[http://www.gmod.org/ GMOD] | :[http://www.gmod.org/ GMOD] | ||
Revision as of 20:40, 21 May 2013
Model Organisms
| Database | Organism | Organism (Genus and species) |
|---|---|---|
| BeeBase | Honey Bee | Apis mellifera |
| BeetleBase | Red Flour Beetle | Tribolium castaneum |
| DictyBase | Soil Amoeba | Dictyostelium discoideum |
| EcoCyc | Bacteria | Escherichia coli |
| Gramene | Grasses | |
| MGI | Mouse | Mus musculus |
| OMIM | Human | Homo sapiens |
| SGD | Budding Yeast | Saccharomyces cerevisiae |
| S. pombe GeneDB | Fission Yeast | Schizosaccharomyces pombe |
| TAIR | Mouse-ear cress | Arabidopsis thaliana |
| VectorBase | Mosquitos and Deer Tick | Anopheles gambiae, Aedes aegypti, Culex pipiens quinquefasciatus, Ixodes scapularis |
| WormBase | Round worms | Caenorhabditis |
| ZFIN | Zebrafish | Danio rerio |
Related Projects
- GMOD
- Gene Ontology (GO)
- Reactome
- BDGP (Berkeley Drosophila Genome Project)
- DGRC (Drosophila Genomics Resource Center)
- DIS by issue
- FlyExpress
- Interactive Fly
- modENCODE
- Textpresso for Fly
Stock Collections
D. melanogaster Collections
Species Collections
Other public collections
- Drosophila Gene Search Project
- Information about ordering P{GS} lines can be found at http://gsdb.biol.metro-u.ac.jp/~dclust/index.html
- Ehime Drosophila Species Stock Center of Japan
- A collection of wild-type strains of D. melanogaster and strains of some 30 species can be found at http://kyotofly.kit.ac.jp/ehime/
- FlyTrap Stock Collection
- GFP protein trap lines from the FlyTrap project can be obtained at Yale University, USA at http://flytrap.med.yale.edu/
- FlyView Stock Collection
- Enhancer trap lines from the FlyView project can be obtained at University of Muenster, Germany at http://flyview.uni-muenster.de/
- Kyorin-Fly
- A collection of mutant and wildtype stocks of Drosophila species, especially the Drosophila ananassae species subgroup, D. auraria complex, and D. hydei. http://kyotofly.kit.jp/cgi-bin/kyorin/index.cgi
- Tübingen Drosophila Stock Collection
- A list of approximately 2,000 Drosophila stocks at the Max-Planck-Institute for Developmental Biology.
- UC San Diego Drosophila Stock Center
- Approximately 270 different Drosophila species at University of San Diego, USA can be obtained at https://stockcenter.ucsd.edu/info/welcome.php
- University of Cambridge FlyProt project
- Annotations, expression patterns and sequence data for the YFP protein trap lines from the FlyProt project can be viewed on the Flannotator at http://www.flyprot.org. Stocks are available from the Kyoto Stock Center.
Vectors and Constructs
http://flybase.org/static_pages/lists/vectors.html