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  • FlyBase
    * [[FlyBase:Help|FlyBase Help and Documentation]] * [[FlyBase:Fly_Board|Fly Board]]
    111 bytes (15 words) - 15:16, 23 March 2021
  • FlyBase:FlyBase Positions
    38 bytes (6 words) - 06:53, 2 November 2023
  • FlyBase Help Index
    *[https://www.youtube.com/user/FlyBaseDB FlyBase Video Tutorials] ...:Controlled vocabularies used by FlyBase | Controlled vocabularies used by FlyBase]]
    3 KB (360 words) - 20:45, 13 October 2021
  • FlyBase:FlyBase Help Index
    *[[FlyBase:New_to_Flies | New to Flies links]] '''Topic-specific FlyBase Tweetorials'''
    7 KB (903 words) - 16:26, 11 January 2024
  • FlyBase:FlyBase News
    ...click here: [http://flybase.org/static_pages/news/FlyBase_news.html http://flybase.org/static_pages/news/FlyBase_news.html]
    157 bytes (26 words) - 17:04, 12 June 2014
  • FlyBase:Identifiers: FlyBase IDs
    == FlyBase Identifier Numbers == ...s is to allow unambiguous cross-references both within FlyBase and between FlyBase and other databases.
    3 KB (494 words) - 20:17, 20 May 2013
  • FlyBase:Links to and from FlyBase
    == Links to FlyBase == ...s ways you can link from a resource (webpage, email, publication, etc.) to FlyBase. The links go to either a single data report or searches that can return o
    8 KB (1,386 words) - 16:15, 27 September 2018
  • FlyBase:Zotero support in FlyBase
    0 bytes (0 words) - 22:07, 19 December 2017
  • FlyBase:Controlled vocabularies used by FlyBase
    The controlled vocabularies currently used by FlyBase are: ...ured controlled vocabularies for the annotation of gene products (although FlyBase at present annotates genes with GO terms, as a surrogate for their products
    5 KB (719 words) - 13:26, 3 August 2022
  • FlyBase:ModENCODE data at FlyBase
    .../analysis tools, as well download files and data displays on gene reports. FlyBase dataset reports provide descriptions of how data was generated and analyzed '''Please note''': While FlyBase hosts a selection of tools for browsing and using modENCODE data, it is ''n
    338 KB (49,999 words) - 18:19, 25 May 2023
  • FlyBase:Personal communications to FlyBase
    ...se bibliography and become citable publications upon entry into the public FlyBase database. We encourage the citation of these personal communications in the Gelbart, W.M. (1994). Personal communication to FlyBase.<[http://{{flybaseorg}}/reports/FBrf0075300.html http://{{flybaseorg}}/repo
    986 bytes (140 words) - 21:38, 15 December 2017
  • FlyBase:FlyBase Guides: Pamphlets and Powerpoints
    #REDIRECT [[FlyBase:FlyBase Guides: Pamphlets, Powerpoints, and Posters]]
    73 bytes (8 words) - 19:41, 15 March 2016
  • FlyBase:FlyBase Website Access Fee FAQ
    =='''FLYBASE WEBSITE ACCESS FEE FAQ:'''== ...I am an unfunded lab / small lab / retired FlyBase user — can I still use FlyBase without paying a fee ?'''<br />
    4 KB (655 words) - 11:37, 10 January 2020
  • FlyBase:FlyBase Guides: Pamphlets, Powerpoints, and Posters
    * EDRC 2023. FlyBase 2023: New features and tools to accelerate your research. [[Media:FlyBase_E * CanFly 2023, June 2023. New and Classic Features in FlyBase. [[Media:Canfly2023-compressed_2.pdf | presentation]] (15 slides)
    11 KB (1,305 words) - 10:30, 26 March 2024
  • FlyBase:Links to and from FlyBase (RefMan F)
    FlyBase includes "pointers" to data kept by other databases in two different ways. *FlyBase-curated links
    7 KB (1,216 words) - 16:50, 19 February 2014
  • FlyBase:Differences between JBrowse and GBrowse on FlyBase
    = Table of Differences between features available in FlyBase JBrowse and GBrowse = ...sers of an [http://flybase.org/downloads/archivedata archived] instance of FlyBase earlier than FB2022_05.
    4 KB (476 words) - 17:37, 14 December 2022
  • FlyBase:Reference Manual F. Links to and from FlyBase
    ...a linked list of additional databases likely to be of interest to users of FlyBase. '''FlyBase-curated links'''
    2 KB (311 words) - 18:40, 10 February 2014

Page text matches

  • Main Page
    == Welcome to the FlyBase Wiki! == === Categories on the FlyBase Wiki ===
    889 bytes (106 words) - 17:39, 9 November 2022
  • FlyBase
    * [[FlyBase:Help|FlyBase Help and Documentation]] * [[FlyBase:Fly_Board|Fly Board]]
    111 bytes (15 words) - 15:16, 23 March 2021
  • FlyBase:Report Help
    [[FlyBase:Aberration Report|Aberration Report]] [[FlyBase:Allele Report|Allele Report]]
    1 KB (126 words) - 21:55, 13 October 2021
  • FlyBase:All Resources
    <big>'''[[FlyBase:Drosophila Network Resources|Drosophila Network Resources]]'''</big> *[[FlyBase:Drosophila_Network_Resources#Atlases.2C_Images_and_Videos|Atlases, Images,
    3 KB (386 words) - 16:37, 9 December 2015
  • FlyBase:RefMan G.
    [[FlyBase:Nontraditional alleles|G.1. Nontraditional alleles]] ...ntrolled vocabularies used by FlyBase|G.2. Controlled vocabularies used by FlyBase]]
    849 bytes (102 words) - 16:40, 19 February 2014
  • FlyBase:FlyBase Guides: Pamphlets and Powerpoints
    #REDIRECT [[FlyBase:FlyBase Guides: Pamphlets, Powerpoints, and Posters]]
    73 bytes (8 words) - 19:41, 15 March 2016
  • FlyBase:RefMan F.
    #REDIRECT [[FlyBase:Links to and from FlyBase]]
    47 bytes (7 words) - 07:00, 21 September 2015
  • FlyBase Help Index
    *[https://www.youtube.com/user/FlyBaseDB FlyBase Video Tutorials] ...:Controlled vocabularies used by FlyBase | Controlled vocabularies used by FlyBase]]
    3 KB (360 words) - 20:45, 13 October 2021
  • FlyBase:CitationAndGuides
    #REDIRECT [[FlyBase:Citing FlyBase]]
    36 bytes (4 words) - 16:15, 22 November 2023
  • FlyBase:Reference Manual F. Links to and from FlyBase
    ...a linked list of additional databases likely to be of interest to users of FlyBase. '''FlyBase-curated links'''
    2 KB (311 words) - 18:40, 10 February 2014
  • FlyBase:External Resources
    ...ies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ...ical Advances]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Tools]]</big>
    5 KB (594 words) - 16:34, 21 February 2024
  • FlyBase:Personal communications to FlyBase
    ...se bibliography and become citable publications upon entry into the public FlyBase database. We encourage the citation of these personal communications in the Gelbart, W.M. (1994). Personal communication to FlyBase.<[http://{{flybaseorg}}/reports/FBrf0075300.html http://{{flybaseorg}}/repo
    986 bytes (140 words) - 21:38, 15 December 2017
  • FlyBase:Citing FlyBase
    ...the value of our work to our funding sources. Therefore, if you have used FlyBase during your research project, we urge you to cite us in your published work [[File:Groupphoto2023.jpg|thumb|400px|upright|Members of the FlyBase Consortium in 2023]]
    2 KB (292 words) - 16:15, 22 November 2023
  • FlyBase:Help
    =FlyBase Help= ==[[FlyBase:FlyBase Help Index | FlyBase Help Index]]==
    6 KB (722 words) - 21:15, 11 October 2023
  • FlyBase:Image Report
    ...roughout FlyBase, especially the [[FlyBase:Controlled vocabularies used by FlyBase | Drosophila anatomy ontology]], and maps out areas of an image that corres ...hould be directed to the copyright holder of the original image and not to FlyBase.
    3 KB (397 words) - 14:12, 21 October 2022
  • FlyBase:Courses
    '''FlyBase maintains listings of courses of interest to the Drosophila community.''' Check [http://flybase.org/static_pages/news/courses.html Drosophila Courses] to see any current c
    391 bytes (60 words) - 17:00, 7 January 2015
  • FlyBase:Model Organism Databases
    ...ies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ...nical Advances]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Analysis]]</big>
    3 KB (382 words) - 14:30, 20 September 2023
  • FlyBase:GBrowse
    #REDIRECT [[FlyBase:GBrowse Help]]
    34 bytes (4 words) - 21:45, 12 December 2017
  • FlyBase:CytoSearch
    #REDIRECT [[FlyBase:CytoSearch Help]]
    37 bytes (4 words) - 17:01, 19 January 2018
  • Stock Centers
    #REDIRECT [[FlyBase:Stocks]]
    28 bytes (3 words) - 20:23, 11 October 2017
  • FlyBase:Stock Collections
    #REDIRECT [[FlyBase:Stocks]]
    28 bytes (3 words) - 16:01, 20 March 2018
  • FlyBase:Forums
    [http://flybase.org/forums/ FlyBase Forums]
    62 bytes (8 words) - 19:27, 18 February 2014
  • FlyBase:TermLink
    #REDIRECT [[FlyBase:Vocabularies]]
    34 bytes (3 words) - 14:34, 15 October 2014
  • Antibodies
    #REDIRECT [[FlyBase:Antibodies]]
    32 bytes (3 words) - 17:13, 8 January 2016
  • Stocks
    #REDIRECT [[FlyBase:Stocks]]
    28 bytes (3 words) - 17:14, 8 January 2016
  • RNAi
    #REDIRECT [[FlyBase:RNAi]]
    26 bytes (3 words) - 17:14, 8 January 2016
  • CRISPR
    #REDIRECT [[FlyBase:CRISPR]]
    28 bytes (3 words) - 17:15, 8 January 2016
  • FlyBase:FilesOverview
    #REDIRECT [[FlyBase:Downloads Overview]]
    40 bytes (4 words) - 15:45, 14 September 2015
  • External Resources
    #REDIRECT [[FlyBase:External Resources]]
    40 bytes (4 words) - 17:10, 8 January 2016
  • FlyBase:ID Converter
    #REDIRECT [[FlyBase:ID Validator]]
    34 bytes (4 words) - 11:42, 15 April 2020
  • FlyBase:FlyBase Help Index
    *[[FlyBase:New_to_Flies | New to Flies links]] '''Topic-specific FlyBase Tweetorials'''
    7 KB (903 words) - 16:26, 11 January 2024
  • FlyBase:Fast Track Your Paper
    #REDIRECT [[FlyBase:Fast-Track Your Paper]]
    43 bytes (5 words) - 16:47, 14 October 2020
  • FlyBase:Drosophila Network Resources
    #REDIRECT [[FlyBase:Drosophila Online Resources]]
    49 bytes (5 words) - 17:10, 17 February 2021
  • FlyBase:New to Flies?
    #REDIRECT [[FlyBase:New to Flies]]
    34 bytes (5 words) - 20:41, 24 July 2018
  • Gene Snapshot Contributors
    #REDIRECT [[FlyBase:Gene Snapshot Contributors]]
    48 bytes (5 words) - 18:52, 28 September 2016
  • FlyBase:Papers of interest
    #REDIRECT [[FlyBase:Papers with technical advances]]
    52 bytes (6 words) - 11:56, 10 March 2021
  • FlyBase:Vocabularies
    #REDIRECT [[FlyBase:CV Term Report]]
    36 bytes (5 words) - 23:39, 18 January 2018
  • FlyBase:Human Disease Report
    #REDIRECT [[FlyBase:Human Disease Model Report]]
    48 bytes (6 words) - 16:51, 5 December 2017
  • FlyBase:Author Reagent Table
    #REDIRECT [[FlyBase:Author Reagent Table (ART)]]
    48 bytes (6 words) - 20:23, 16 January 2018
  • FlyBase:FlyBase News
    ...click here: [http://flybase.org/static_pages/news/FlyBase_news.html http://flybase.org/static_pages/news/FlyBase_news.html]
    157 bytes (26 words) - 17:04, 12 June 2014
  • FlyBase:2019AllianceofGenomeResourcesMeeting
    #REDIRECT [[FlyBase:2019 Alliance of Genome Resources Meeting]]
    63 bytes (7 words) - 18:24, 12 June 2019
  • FlyBase:Stock Report
    ...nomic DNA, typically for wild-type for species other than D. melanogaster. FlyBase captures the collection's genetic description of each strain and, when avai ...munications should be directed to the provider of the stock rather than to FlyBase.
    3 KB (426 words) - 19:35, 13 December 2017
  • FlyBase:Tweetorial
    =='''How to find a FlyBase Tweetorial'''== ...dex into the Twitter search box. This allows you to find, for example, the FlyBase tweetorials pertaining to RNAseq, while filtering out the thousands of othe
    4 KB (523 words) - 19:34, 8 March 2023
  • FlyBase:Test gds
    #The ''wingless'' [http://flybase.org/reports/FBgn0004009.html ''wg''] gene. #The ''hedgehog'' [http://flybase.org/reports/FBgn0004644.html ''hh''] gene.
    1 KB (153 words) - 15:30, 22 May 2013
  • FlyBase:Chemical
    |'''Name''' || style="width: 80%;" | The name that FlyBase uses to identify a chemical. The name is generally taken from the [https:// |'''FlyBase ID''' || The '''Primary''' FlyBase identifier number of the chemical, used to uniquely identify the chemical i
    3 KB (420 words) - 18:11, 12 October 2023
  • FlyBase:ID Validator
    ...validation table that can either be downloaded as a file or exported to a FlyBase HitList for futher processing (including conversion between data types). * FlyBase IDs (for most data classes; e.g. FBgn (gene), FBal (allele), FBrf (referenc
    4 KB (591 words) - 12:44, 15 April 2020
  • FlyBase:Controlled vocabularies used by FlyBase
    The controlled vocabularies currently used by FlyBase are: ...ured controlled vocabularies for the annotation of gene products (although FlyBase at present annotates genes with GO terms, as a surrogate for their products
    5 KB (719 words) - 13:26, 3 August 2022
  • FlyBase:Identifiers: FlyBase IDs
    == FlyBase Identifier Numbers == ...s is to allow unambiguous cross-references both within FlyBase and between FlyBase and other databases.
    3 KB (494 words) - 20:17, 20 May 2013
  • FlyBase:Author Guidelines
    <big>'''Advice to authors: how to improve your data in FlyBase'''</big> ...to facilitate accurate incorporation of your data into FlyBase. By helping FlyBase get it right, you'll be improving the service to all our users and aiding t
    4 KB (690 words) - 16:03, 15 February 2024
  • FlyBase:References Section
    The references section of FlyBase displays all references that have been associated with the report being vie ...be displayed. This type highlights those papers that have been flagged by FlyBase as providing in depth information on the gene in question.
    1,011 bytes (150 words) - 22:11, 21 December 2018
  • FlyBase:Cell Line Report
    FlyBase attributes data to the publication that reported it, so that users can easi |Symbol || style="width: 80%;" | The valid symbol that is used in FlyBase.
    4 KB (632 words) - 21:30, 11 October 2023
  • FlyBase:Identifiers
    == FlyBase Identifier Numbers == ...s is to allow unambiguous cross-references both within FlyBase and between FlyBase and other databases.
    3 KB (513 words) - 16:18, 19 September 2018
  • FlyBase:Using FTP Archives
    ...ease is available at our FTP archives, which you can reach on the [https://flybase.org/downloads/archivedata Archived Data] page, from the Downloads tab of th From the [https://flybase.org/downloads/archivedata Archived Data] page, scroll down to the Main Data
    4 KB (667 words) - 15:37, 22 February 2024
  • FlyBase:Gene Snapshots
    ...t is based on key points solicited from expert researchers, and revised by FlyBase curators. Each Snapshot is associated with a review date, and cases that ar ...general, non-Drosophilist audience. These key points were then revised by FlyBase curators for consistency in length and format.
    3 KB (468 words) - 11:51, 14 April 2021
  • FlyBase:FlyBase Website Access Fee FAQ
    =='''FLYBASE WEBSITE ACCESS FEE FAQ:'''== ...I am an unfunded lab / small lab / retired FlyBase user — can I still use FlyBase without paying a fee ?'''<br />
    4 KB (655 words) - 11:37, 10 January 2020
  • Gene Snapshots
    ...t is based on key points solicited from expert researchers, and revised by FlyBase curators. Each Snapshot is associated with a review date, and cases that ar ...general, non-Drosophilist audience. These key points were then revised by FlyBase curators for consistency in length and format.
    3 KB (477 words) - 12:14, 11 June 2019
  • FlyBase:Natural Transposon Report
    |'''Symbol''' || style="width: 80%;" | The valid symbol that is used in FlyBase for the natural transposon. ...fix is displayed wherever the natural transposon symbol is used throughout FlyBase. For D.melanogaster natural transposons, the species prefix is only display
    5 KB (689 words) - 22:10, 11 December 2017
  • FlyBase:Neuroscience
    ...ies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ...ical Advances]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Tools]]</big>
    6 KB (834 words) - 21:19, 11 October 2023
  • FlyBase:Differences between JBrowse and GBrowse on FlyBase
    = Table of Differences between features available in FlyBase JBrowse and GBrowse = ...sers of an [http://flybase.org/downloads/archivedata archived] instance of FlyBase earlier than FB2022_05.
    4 KB (476 words) - 17:37, 14 December 2022
  • FlyBase:Experimental Tool
    | '''Symbol''' || The FlyBase symbol for the experimental tool. | '''Name''' || The FlyBase full name for the experimental tool.
    5 KB (767 words) - 10:53, 24 August 2018
  • FlyBase:FlyBase Guides: Pamphlets, Powerpoints, and Posters
    * EDRC 2023. FlyBase 2023: New features and tools to accelerate your research. [[Media:FlyBase_E * CanFly 2023, June 2023. New and Classic Features in FlyBase. [[Media:Canfly2023-compressed_2.pdf | presentation]] (15 slides)
    11 KB (1,305 words) - 10:30, 26 March 2024
  • FlyBase:Community Advisory Group
    ==What is the FlyBase Community Advisory Group?== ...aim of '''gaining greater feedback from the community''' about changes in FlyBase.
    7 KB (902 words) - 14:38, 27 November 2023
  • FlyBase:Links to and from FlyBase (RefMan F)
    FlyBase includes "pointers" to data kept by other databases in two different ways. *FlyBase-curated links
    7 KB (1,216 words) - 16:50, 19 February 2014
  • FlyBase:RNAi
    ...ies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ...ical Advances]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Tools]]</big>
    7 KB (913 words) - 17:03, 15 February 2024
  • FlyBase:Clone Report
    FlyBase attributes data to the publication that reported it, so that users can easi |'''Symbol''' || style="width: 80%;" | The valid symbol that is used in FlyBase for the clone.
    7 KB (1,079 words) - 21:00, 13 December 2017
  • FlyBase:Links to and from FlyBase
    == Links to FlyBase == ...s ways you can link from a resource (webpage, email, publication, etc.) to FlyBase. The links go to either a single data report or searches that can return o
    8 KB (1,386 words) - 16:15, 27 September 2018
  • FlyBase:Vocabularies Tool
    ...th the term. For a field-by-field description of the CV Term reports see [[FlyBase:Vocabularies | '''CV Term Report Help''']]. ...tps://www.youtube.com/watch?v=jgCON15SiRo Finding related genes/alleles in FlyBase: Vocabularies]
    5 KB (836 words) - 23:51, 23 January 2018
  • FlyBase:Antibodies
    ...ies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ...ical Advances]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Tools]]</big>
    9 KB (1,136 words) - 21:19, 11 October 2023
  • FlyBase:New to Flies
    '''FlyBase''' is a database of genetic and molecular data for ''D. melanogaster'' and ...answers to common issues, check out the '''[https://wiki.flybase.org/wiki/FlyBase:FAQ Frequently Asked Questions]''' page.
    7 KB (980 words) - 19:35, 21 February 2023
  • FlyBase:Reference Report
    ..., abstract, external IDs (PubMed, PubMed Central, DOI), and links to other FlyBase Report pages for any objects curated from the reference. |'''FlyBase ID''' || The unique FlyBase identifier for the reference (FBrf).
    7 KB (984 words) - 07:42, 8 January 2019
  • FlyBase:Balancer/Genotype variant Report
    ...guide to the information provided in the Balancer/Genotype Variant Report. FlyBase attributes data to the publication that reported it, so that users can easi |'''Symbol'''|| style="width: 80%;" | The valid symbol that is used in FlyBase for the balancer/genotype variant.
    7 KB (1,114 words) - 15:54, 11 December 2017
  • FlyBase:Fast-Track Your Paper
    ...https://{{flybaseorg}}/static/release_schedule FlyBase release schedule]); FlyBase curators will immediately be able to access your FTYP submission in order t ...ger list of genes (no more than 100) can be added in the form of a list of FlyBase gene IDs (''e.g.'' FBgn0000490). However, papers including large screens or
    4 KB (637 words) - 14:21, 17 May 2022
  • FlyBase:Strain Report
    ...eld-by-field guide to the information provided in the '''Strain Report'''. FlyBase attributes data to the publication that reported it, so that users can easi |Symbol || style="width: 80%;" | The valid symbol that is used in FlyBase.
    7 KB (967 words) - 22:02, 11 December 2017
  • FlyBase:CV Term Report
    ...e [[FlyBase:Controlled vocabularies used by FlyBase | ontologies]] used in FlyBase. ...tps://www.youtube.com/watch?v=jgCON15SiRo Finding related genes/alleles in FlyBase: Vocabularies].
    6 KB (940 words) - 18:41, 12 October 2023
  • FlyBase:Gene Group Report
    ...l''' [https://www.youtube.com/watch?v=GQ_2X29Gx-E Finding related genes in FlyBase: Gene Groups)]. In addition, Gene Report pages contain a section for ‘Gen Importantly, all Gene Groups in FlyBase are compiled manually by FlyBase curators, based on published literature. The basis for the membership of e
    9 KB (1,452 words) - 09:48, 9 February 2022
  • FlyBase:Sequence Feature Report
    FlyBase attributes data to the publication that reported it, so that users can easi |Symbol || style="width: 80%;" | The valid symbol that is used in FlyBase.
    9 KB (1,272 words) - 17:44, 20 December 2022
  • FlyBase:Stocks
    ...ies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ...ical Advances]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Tools]]</big>
    12 KB (1,711 words) - 15:59, 15 February 2024
  • FlyBase:Complete list of GBrowse/JBrowse Track Differences
    ...sers of an [http://flybase.org/downloads/archivedata archived] instance of FlyBase earlier than FB2022_05. ...release at [http://flybase.org/ flybase.org], please see our page about [[FlyBase:JBrowse]], the genome viewer that replaced GBrowse.
    2 KB (296 words) - 17:48, 14 December 2022
  • FlyBase:Aberration Report
    FlyBase attributes data to the publication that reported it, so that users can easi |'''Symbol''' || style="width: 80%;" | The valid symbol that is used in FlyBase for the aberration.
    17 KB (2,497 words) - 18:20, 20 December 2022
  • FlyBase:Interaction Report
    |FlyBase ID || The FlyBase identifier number of the physical interaction, used to uniquely identify th For each gene in the interaction, a link to the FlyBase "Interactions Browser" is provided that will display all physical or geneti
    5 KB (775 words) - 20:11, 3 January 2018
  • FlyBase:Batch Download
    ...Download tool provides access to data from a variety of specific fields in FlyBase reports for a specified list of symbols or IDs. The data from multiple fiel =Validating FlyBase symbols and IDs=
    4 KB (782 words) - 12:49, 15 April 2020
  • FlyBase:Recombinant Construct Report
    cDNA clones are described in the [[FlyBase:Clone Report|Clone Report]]. For commonly used recombinant constructs, FlyBase has curated detailed descriptions of the component DNA segments. For each i
    14 KB (2,088 words) - 09:34, 15 December 2021
  • FlyBase:Transgenics Drosophila Stocks Log
    ...ted. The information in the template is intended to facilitate curation by FlyBase and Stock Centers and to provide complete and accurate information of indiv
    767 bytes (111 words) - 18:43, 19 January 2024
  • FlyBase:Images
    ...ies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ...ical Advances]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Tools]]</big>
    9 KB (1,212 words) - 21:20, 11 October 2023
  • FlyBase:SequenceDownloader
    ...g of sequence data by genomic location for any of the sequenced species in FlyBase. To download sequence by genomic location, select your species, enter in o For ID mode you have to supply a valid FlyBase ID and a supported type. Supported types include FBgn, gene_extended, CDS,
    5 KB (777 words) - 17:05, 29 January 2018
  • FlyBase:Polypeptide Report
    |'''Symbol''' || style="width: 80%;" | The valid symbol that is used in FlyBase for the polypeptide. ...ies prefix is displayed wherever the polypeptide symbol is used throughout FlyBase. For D.melanogaster polypeptides, the species prefix is only displayed in t
    6 KB (993 words) - 17:45, 20 December 2022
  • FlyBase:Human Disease Model Report
    |'''Name'''|| style="width: 80%;" | The valid full name that is used in FlyBase for the Human Disease Model. |'''FlyBase ID'''|| The Primary FlyBase identifier number of the human disease, used to uniquely identify the Human
    21 KB (3,044 words) - 20:48, 2 January 2018
  • FlyBase:Transcript Report
    ...s. Annotated ''D. melanogaster'' transcripts are transcripts identified by FlyBase annotators based on a variety of evidence including cDNA/ESTs, RNA-seq expr |'''Symbol''' || style="width: 80%;" | The valid symbol that is used in FlyBase for the transcript.
    9 KB (1,305 words) - 19:00, 20 December 2022
  • FlyBase:CytoSearch Help
    ..., and estimated cytology is used when only meiotic data are available. The FlyBase correspondence tables for cytological and sequence level maps are used to e ...aberration, and stock symbols on the results page link to their respective FlyBase reports. If multiple stocks are available, the number of stocks is shown, w
    3 KB (425 words) - 17:48, 20 December 2022
  • FlyBase:Computed cytological data
    ...nking sequence) have an inferred cytological location which is computed by FlyBase based on their sequence location. FlyBase currently only computes cytological data in this way for objects that have
    11 KB (1,834 words) - 21:55, 20 December 2022
  • FlyBase:Request for Fly Board Nominations
    ...oductive relationship between the research community and resources such as FlyBase, the Drosophila Genome Resource Center, groups heading efforts to develop b ...to the Fly Board for three additional years after their term ends. (See [[FlyBase:Fly_Board#Rules_of_Charter | '''Responsibilities of the Drosophila Board Pr
    4 KB (593 words) - 19:41, 31 May 2019
  • FlyBase:Frequently Asked Questions
    == How can I obtain a stock listed in FlyBase? == ...-mail address is included in the &quot;To Request Stock&quot; field of the FlyBase Stock Report.
    11 KB (1,798 words) - 16:15, 12 June 2014
  • FlyBase:JBrowse
    D. melanogaster is the only genome available for viewing with JBrowse in FlyBase. To select a specific region of the genome to view, enter a symbol, FlyBase ID, or sequence location in the coordinate box at the top of the JBrowse vi
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  • FlyBase:Insertion Report
    |'''Symbol''' || style="width: 80%;" | The valid symbol that is used in FlyBase for the insertion. If the insertion results in a described allele, the alle ...he species prefix is displayed wherever the gene symbol is used throughout FlyBase. For D.melanogaster genes, the species prefix is only displayed in the '''G
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  • FlyBase:Maps
    ...ies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ...ical Advances]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Tools]]</big>
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  • FlyBase:ScRNA-Seq
    ...ies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ...ical Advances]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Tools]]</big>
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  • FlyBase:Introduction to Drosophila Research
    FlyBase is a database of genetic and molecular data for D. melanogaster and other D
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  • FlyBase:Dataset-Collection Report
    ...These are represented as distinct but related components, each a distinct FlyBase entity with its own tailored report: the "biosample" (biological source mat |'''Name''' || all || The name that FlyBase uses for this dataset.
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  • FlyBase:Pathway Report
    The <b>‘Gene Group - Pathway Report’</b> is a sub-category of our [[FlyBase:Gene_Group_Report|Gene Group]] resource, which houses functional collection All Pathways Reports in FlyBase are compiled manually by FlyBase curators, based on research literature, using standards for inclusion agree
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  • FlyBase:Gene Ontology (GO) Annotation
    ...lthough GO terms are intended to describe the properties of gene products, FlyBase currently assigns GO terms to genes rather than protein or RNA. FlyBase is one of the founding members of the [http://geneontology.org/ Gene Ontolo
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  • FlyBase:Feature Mapper
    ...dinates, and the feature symbol. Where applicable, the symbol links to the FlyBase report page for that feature. Search results can be saved as a GFF file or '''Step 1.''' Enter one or more IDs, symbols, or annotation IDs for FlyBase features (genes, insertions, transcripts, etc.) that have associated sequen
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  • FlyBase:Allele Report
    ...have been introduced into Drosophila via transgenic constructs. See the [[FlyBase:Nontraditional_alleles|Nontraditional alleles]] documentation for a detaile ...o the right of the data. The exception in the '''Allele Report''' is the [[FlyBase:Allele Report#General Information|General Information]] section which conta
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  • FlyBase:ModENCODE RNA-Seq Overview
    https://wiki.flybase.org/wiki/FlyBase:ModENCODE_data_at_FlyBase ...additional query/analysis tools, as well as data displays on gene reports. FlyBase dataset reports provide descriptions of how data was generated and analyzed
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  • FlyBase:Nontraditional alleles
    ...amed by researchers, and have been named by FlyBase, their presentation in FlyBase requires some explanation: ...rsome (this may not be strictly true for such alleles curated early in the FlyBase project).
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  • FlyBase:RNA-Seq Overview
    The primary RNA-Seq data in FlyBase are the modENCODE data originally published in [http://{{flybaseorg}}/repor ...s, or cell lines. By default, the many tracks are displayed in the layered FlyBase “TopoView” format, and data are shown on a log2 scale, since they range
    8 KB (1,281 words) - 17:37, 20 December 2022
  • FlyBase:Curation of Genetic Data
    ...amed by researchers, and have been named by FlyBase, their presentation in FlyBase requires some explanation: ...rsome (this may not be strictly true for such alleles curated early in the FlyBase project).
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  • FlyBase:Funding
    [[Category:FlyBase]]
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  • FlyBase:Computed Feature type of genes
    The single term in this field is computed by FlyBase from the full list of SO terms listed in the SEQUENCE ONTOLOGY: Class of ge
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  • FlyBase:GBrowse Help
    ...sers of an [http://flybase.org/downloads/archivedata archived] instance of FlyBase earlier than FB2022_05. ...release at [http://flybase.org/ flybase.org], please see our page about [[FlyBase:JBrowse]], the genome viewer that replaced GBrowse.
    18 KB (2,893 words) - 17:46, 14 December 2022
  • FlyBase:Drosophila Material Resources
    * Please see our dedicated [[FlyBase:Stocks|Stocks]] resource page. * Please see our dedicated [[FlyBase:CRISPR|CRISPR]] resource page.
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  • FlyBase:QueryBuilder Help
    ...re sophisticated searches relative to QuickSearch or other search tools on FlyBase. Using QB, you can search any field in a FlyBase report using a QuerySegment, and then combine the resulting hit-list with s
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  • FlyBase:QuickSearch
    The QuickSearch tool on the FlyBase home page allows searching across all FlyBase reports. Forms for searching specific types of data have been separated int *[[FlyBase:QuickSearch#Search FlyBase tab| Search FlyBase tab]]
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  • Resource Portal
    FlyBase maintains extensive lists of useful external Network and Material Resources '''[http://flybase.org/wiki/FlyBase:Drosophila_Network_Resources Network Resources]'''<br/>
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  • FlyBase:CRISPR
    ...ies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ...ical Advances]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Tools]]</big>
    18 KB (2,436 words) - 15:32, 27 March 2024
  • FlyBase:Tools Overview
    ...ion bar. In addition to the Navigation bar, which can be accessed from any FlyBase page, the homepage also has direct links to the most commonly used tools. *[[FlyBase:Tools Overview#Overview of Search Strategies|Overview of Search Strategies]
    37 KB (5,962 words) - 20:01, 29 March 2023
  • FlyBase:FAQ
    ! style="text-align: left; background: #C8C8CD" | <big>FlyBase FAQ</big> ...he data sets available are described on the [https://wiki.flybase.org/wiki/FlyBase:Downloads_Overview Downloads Overview page].
    66 KB (10,325 words) - 16:32, 12 March 2024
  • FlyBase:Fly Board
    ...ductive relationships between the research community and resources such as FlyBase, Drosophila stock centers, groups maintaining and distributing other Drosop ...email list please sign up for the [http://flybase.org/community/newsletter FlyBase newsletter].
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  • FlyBase:Interaction Browser
    The tool accepts a FlyBase gene or allele ID, and valid gene symbols (e.g. "fz") or allele symbols (e.
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  • FlyBase:Gene Model Annotation Guidelines
    ..., Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM, and the FlyBase Consortium. (2015) Gene Model Annotations for ''Drosophila melanogaster'': ..., Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM., and the FlyBase Consortium. (2015) Gene Model Annotations for ''Drosophila melanogaster'':
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  • FlyBase:JBrowse Tracks
    ...ide View''' When zoomed in, the DNA sequence of the Release 6 (R6) [http://flybase.org/reports/FBrf0227719.html (Hoskins et al, 2015)] genome is shown as colo ...dow containing an automated gene summary when moused over and links to the FlyBase Gene Report when clicked.
    61 KB (8,553 words) - 09:36, 22 February 2024
  • FlyBase:Downloads Overview
    ...ta files available at the [ftp://ftp.flybase.net/releases/current/ current FlyBase FTP repository]. Files can be downloaded directly through the web interface .../ past releases]. It's also possible to browse the FTP file by [http://ftp.flybase.net/genomes genomes].</br>
    87 KB (13,053 words) - 16:03, 5 April 2024
  • FlyBase:Overview
    ...ta and resources at external databases are also incorporated. As a result, FlyBase serves as a nexus for all Drosophila-related information. ...and guide for our diverse user base. Please refer to documentation on the FlyBase website and in cited publications for more details.
    54 KB (8,096 words) - 21:41, 20 December 2022
  • FlyBase:Gene Report
    ...ly via its mutant phenotype. Both types of locus are given gene reports in FlyBase. ...ne reports for genes derived from species within the family Drosophilidae, FlyBase also includes gene reports for non-drosophilid genes ("foreign genes") that
    78 KB (11,675 words) - 12:18, 17 January 2024
  • FlyBase:GBrowse Tracks
    ...sers of an [http://flybase.org/downloads/archivedata archived] instance of FlyBase earlier than FB2022_05. ...release at [http://flybase.org/ flybase.org], please see our page about [[FlyBase:JBrowse]], the genome viewer that replaced GBrowse.
    44 KB (6,407 words) - 17:45, 14 December 2022
  • FlyBase:GSEA
    ...tools with links and information. A list of more GSEA tools can be found [[FlyBase:Drosophila_Online_Resources#Gene_Set_Enrichment_Analysis|<b>here</b>]].
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  • FlyBase:About
    ==FlyBase Consortium== The FlyBase project is carried out by a consortium of Drosophila researchers and comput
    51 KB (6,675 words) - 06:50, 2 April 2024
  • FlyBase:Nomenclature
    ...red here. Please [http://{{flybaseorg}}/cgi-bin/mailto-fbhelp.html contact FlyBase] to discuss such cases or any other aspect of the nomenclature. ==Policy for establishing FlyBase-approved gene symbols and names ==
    90 KB (13,861 words) - 06:53, 8 June 2021
  • FlyBase:Drosophila Online Resources
    ...y sequenced Drosophila species:<br />[http://flybase.org/wiki/FlyBase:Maps FlyBase Maps] * <b>List of Drosophila reference genome assemblies</b> at FlyBase, NCBI and UCSC. [[File:DrosophilaGenomeAssemblies.xls]] (spreadsheet) ''Upd
    65 KB (9,462 words) - 13:33, 19 March 2024
  • FlyBase:List of Contributors
    '''It is people like you that help sustain FlyBase by paying the website access fee and contributing !!<br /> PLEASE [mailto:FlyBase-fees@morgan.harvard.edu?subject=contributor%20edits LET US KNOW] IF YOUR NA
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  • FlyBase:Gene Snapshot Contributors
    ...l to the following people for contributing their expert knowledge toward [[FlyBase:Gene Snapshots| Gene Snapshots]]. We are still in the process of entering g
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  • FlyBase:ModENCODE data at FlyBase
    .../analysis tools, as well download files and data displays on gene reports. FlyBase dataset reports provide descriptions of how data was generated and analyzed '''Please note''': While FlyBase hosts a selection of tools for browsing and using modENCODE data, it is ''n
    338 KB (49,999 words) - 18:19, 25 May 2023
  • FlyBase:Papers with technical advances
    ...ies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ...ical Advances]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Tools]]</big>
    189 KB (24,537 words) - 09:57, 2 April 2024
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