Difference between revisions of "FlyBase Help Index"
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(Created page with "'''Data''' '''Curation Conventions '''* Controlled vocabularies used by FlyBase * FlyBase:Nontraditional alleles | Non...") |
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| − | ''' | + | '''Video Tutorials''' |
| + | *[https://www.youtube.com/user/FlyBaseDB FlyBase Video Tutorials] | ||
| − | |||
| − | |||
| − | |||
| − | '''Computed Fields | + | '''Data Documentation''' |
| − | '''* [[FlyBase:Computed Feature type of genes | Computed Feature type of genes]] | + | |
| − | * [[FlyBase:Computed cytological data | Computed cytological data]] | + | '''Curation Conventions''' |
| + | *[[FlyBase:Controlled vocabularies used by FlyBase | Controlled vocabularies used by FlyBase]] | ||
| + | *[[FlyBase:Nontraditional alleles | Nontraditional alleles]] | ||
| + | *[[FlyBase:Vectors and Constructs | Vectors and Constructs]] | ||
| + | *[[FlyBase:Gene Ontology (GO) Annotation | Gene Ontology (GO) Annotation]] | ||
| + | |||
| + | '''Field by Field guides to FlyBase Report Help''' | ||
| + | *[[FlyBase:Report Help | All Reports]] | ||
| + | *[[FlyBase:Aberration Report | Aberration Report]] | ||
| + | *[[FlyBase:Allele Report | Allele Report]] | ||
| + | *[[FlyBase:Balancer/Genotype variant Report | Balancer/Genotype variant Report]] | ||
| + | *[[FlyBase:Clone Report | Clone Report]] | ||
| + | *[[FlyBase:Cell Line Report | Cell Line Report]] | ||
| + | *[[FlyBase:Gene Report | Gene Report]] | ||
| + | *[[FlyBase:Human Disease Report | Human Disease Model Report]] | ||
| + | *[[FlyBase:Image Report | Image Report]] | ||
| + | *[[FlyBase:Insertion Report | Insertion Report]] | ||
| + | *[[FlyBase:Interaction Report | Interaction Report]] | ||
| + | *[[FlyBase:Large Dataset Metadata Report | Large Dataset Metadata Report]] | ||
| + | *[[FlyBase:Natural Transposon Report | Natural Transposon Report]] | ||
| + | *[[FlyBase:Person Report | Person Report]] | ||
| + | *[[FlyBase:Polypeptide Report | Polypeptide Report]] | ||
| + | *[[FlyBase:Recombinant Construct Report | Recombinant Construct Report]] | ||
| + | *[[FlyBase:Reference Report | Reference Report]] | ||
| + | *[[FlyBase:Sequence Feature Report | Sequence Feature Report]] | ||
| + | *[[FlyBase:Strain Report | Strain Report]] | ||
| + | *[[FlyBase:Stock Report | Stock Report]] | ||
| + | *[[FlyBase:Transcript Report | Transcript Report]] | ||
| + | *[[FlyBase:Vocabularies | Vocabularies Term Report]] | ||
| + | |||
| + | '''Computed Fields''' | ||
| + | *[[FlyBase:Computed Feature type of genes | Computed Feature type of genes]] | ||
| + | *[[FlyBase:Computed cytological data | Computed cytological data]] | ||
| + | *[[FlyBase:Precomputed Files | Precomputed Files]] | ||
'''Downloads''' | '''Downloads''' | ||
*[[FlyBase:Downloads Overview | Downloads Overview]] | *[[FlyBase:Downloads Overview | Downloads Overview]] | ||
| − | ''' | + | |
| − | + | '''Tools Documentation''' | |
| − | + | ||
| − | + | '''Query Tools Help | |
| − | + | ''' | |
| − | **[[FlyBase: | + | *[[FlyBase:Tools_Overview#Jump_to_Gene | Jump to Gene]] |
| − | + | *[[FlyBase:QuickSearch | FlyBase QuickSearch]] | |
| − | + | *[http://beta.flybase.org/cgi-bin/qb.pl QueryBuilder] | |
| − | + | *[http://beta.flybase.org/vocabularies Vocabularies] | |
| − | + | ||
| − | + | '''Genomic/Map tools Help | |
| − | + | ''' | |
| − | ** | + | * BLAST |
| − | **[[FlyBase: | + | * [[FlyBase:GBrowse | FlyBase GBrowse Help]] |
| − | + | * [[FlyBase:GBrowse Tracks | GBrowse Tracks]] | |
| − | + | * [[FlyBase:JBrowse | FlyBase JBrowse Help]] | |
| − | * | + | * [[FlyBase:JBrowse Tracks | JBrowse Tracks]] |
| − | + | * [http://beta.flybase.org/cytosearrch CytoSearch] | |
| − | + | * [http://beta.flybase.org/featuremapper FeatureMapper] | |
| − | + | ||
| − | + | '''Retrieve/Convert Tools Help | |
| − | + | ''' *[http://beta.flybase.org/batchdownload | Batch Download] | |
| − | + | * Coordinate Converter | |
| + | * ID Converter | ||
| + | * Sequence Downloader | ||
| + | |||
| + | '''RNA-Seq Tools Help | ||
| + | '''*[[FlyBase:Tools Overview |Tools Overview]] | ||
| + | *[http://beta.flybase.org/rnaseq/profile_search RNA-Seq Profile] | ||
| + | *[http://beta.flybase.org/rnaseq/simsearch RNA-Seq Similarity] | ||
| + | *[http://beta.flybase.org/rnaseq/region RNA-Seq by Region] | ||
| + | |||
| + | |||
| + | '''Author Help | ||
| + | ''' | ||
| + | *[[FlyBase:Author Guidelines | Author Guidelines]] | ||
| + | *[[FlyBase:Personal communications to FlyBase | Personal Communications to FlyBase]] | ||
| + | *[[FlyBase:Nomenclature | Nomenclature]] | ||
| + | *[[FlyBase:Links to and from FlyBase | Links to and from FlyBase]] | ||
Revision as of 21:38, 4 December 2017
Video Tutorials
Data Documentation
Curation Conventions
- Controlled vocabularies used by FlyBase
- Nontraditional alleles
- Vectors and Constructs
- Gene Ontology (GO) Annotation
Field by Field guides to FlyBase Report Help
- All Reports
- Aberration Report
- Allele Report
- Balancer/Genotype variant Report
- Clone Report
- Cell Line Report
- Gene Report
- Human Disease Model Report
- Image Report
- Insertion Report
- Interaction Report
- Large Dataset Metadata Report
- Natural Transposon Report
- Person Report
- Polypeptide Report
- Recombinant Construct Report
- Reference Report
- Sequence Feature Report
- Strain Report
- Stock Report
- Transcript Report
- Vocabularies Term Report
Computed Fields
Downloads
Tools Documentation
Query Tools Help
Genomic/Map tools Help
- BLAST
- FlyBase GBrowse Help
- GBrowse Tracks
- FlyBase JBrowse Help
- JBrowse Tracks
- CytoSearch
- FeatureMapper
Retrieve/Convert Tools Help *| Batch Download
- Coordinate Converter
- ID Converter
- Sequence Downloader
RNA-Seq Tools Help *Tools Overview
Author Help