Difference between revisions of "FlyBase Help Index"

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'''Data'''
+
'''Video Tutorials'''
 +
*[https://www.youtube.com/user/FlyBaseDB FlyBase Video Tutorials]
  
'''Curation Conventions
 
'''* [[FlyBase:Controlled vocabularies used by FlyBase | Controlled vocabularies used by FlyBase]]
 
* [[FlyBase:Nontraditional alleles | Nontraditional alleles]]
 
  
'''Computed Fields
+
'''Data Documentation'''
'''* [[FlyBase:Computed Feature type of genes | Computed Feature type of genes]]
+
 
* [[FlyBase:Computed cytological data | Computed cytological data]]
+
'''Curation Conventions'''
 +
*[[FlyBase:Controlled vocabularies used by FlyBase | Controlled vocabularies used by FlyBase]]
 +
*[[FlyBase:Nontraditional alleles | Nontraditional alleles]]
 +
*[[FlyBase:Vectors and Constructs | Vectors and Constructs]]
 +
*[[FlyBase:Gene Ontology (GO) Annotation | Gene Ontology (GO) Annotation]]
 +
 
 +
'''Field by Field guides to FlyBase Report Help'''
 +
*[[FlyBase:Report Help | All Reports]]
 +
*[[FlyBase:Aberration Report | Aberration Report]]
 +
*[[FlyBase:Allele Report | Allele Report]]
 +
*[[FlyBase:Balancer/Genotype variant Report | Balancer/Genotype variant Report]]
 +
*[[FlyBase:Clone Report | Clone Report]]
 +
*[[FlyBase:Cell Line Report | Cell Line Report]]
 +
*[[FlyBase:Gene Report | Gene Report]]
 +
*[[FlyBase:Human Disease Report | Human Disease Model Report]]
 +
*[[FlyBase:Image Report | Image Report]]
 +
*[[FlyBase:Insertion Report | Insertion Report]]
 +
*[[FlyBase:Interaction Report | Interaction Report]]
 +
*[[FlyBase:Large Dataset Metadata Report | Large Dataset Metadata Report]]
 +
*[[FlyBase:Natural Transposon Report | Natural Transposon Report]]
 +
*[[FlyBase:Person Report | Person Report]]
 +
*[[FlyBase:Polypeptide Report | Polypeptide Report]]
 +
*[[FlyBase:Recombinant Construct Report | Recombinant Construct Report]]
 +
*[[FlyBase:Reference Report | Reference Report]]
 +
*[[FlyBase:Sequence Feature Report | Sequence Feature Report]]
 +
*[[FlyBase:Strain Report | Strain Report]]
 +
*[[FlyBase:Stock Report | Stock Report]]
 +
*[[FlyBase:Transcript Report | Transcript Report]]
 +
*[[FlyBase:Vocabularies | Vocabularies Term Report]]
 +
 
 +
'''Computed Fields'''
 +
*[[FlyBase:Computed Feature type of genes | Computed Feature type of genes]]
 +
*[[FlyBase:Computed cytological data | Computed cytological data]]
  
 
'''Downloads'''
 
'''Downloads'''
 
*[[FlyBase:Downloads Overview | Downloads Overview]]
 
*[[FlyBase:Downloads Overview | Downloads Overview]]
  
'''Field by Field guides to FlyBase Report Help'''
+
 
**[[FlyBase:Report Help | All Reports]]
+
'''Tools Documentation'''
**[[FlyBase:Aberration Report | Aberration Report]]
+
 
**[[FlyBase:Allele Report | Allele Report]]
+
'''Query Tools Help
**[[FlyBase:Balancer/Genotype variant Report | Balancer/Genotype variant Report]]
+
'''
**[[FlyBase:Clone Report | Clone Report]]
+
*[[FlyBase:Tools_Overview#Jump_to_Gene | Jump to Gene]]
**[[FlyBase:Cell Line Report | Cell Line Report]]
+
*[[FlyBase:QuickSearch | FlyBase QuickSearch]]
**[[FlyBase:Gene Report | Gene Report]]
+
*[http://beta.flybase.org/cgi-bin/qb.pl QueryBuilder]
**[[FlyBase:Human Disease Report | Human Disease Model Report]]
+
*[http://beta.flybase.org/vocabularies Vocabularies]
**[[FlyBase:Image Report | Image Report]]
+
 
**[[FlyBase:Insertion Report | Insertion Report]]
+
'''Genomic/Map tools Help
**[[FlyBase:Interaction Report | Interaction Report]]
+
'''
**[[FlyBase:Large Dataset Metadata Report | Large Dataset Metadata Report]]
+
* BLAST
**[[FlyBase:Natural Transposon Report | Natural Transposon Report]]
+
* [[FlyBase:GBrowse | FlyBase GBrowse Help]]
**[[FlyBase:Person Report | Person Report]]
+
* [[FlyBase:GBrowse Tracks | GBrowse Tracks]]
**[[FlyBase:Polypeptide Report | Polypeptide Report]]
+
* [[FlyBase:JBrowse | FlyBase JBrowse Help]]
**[[FlyBase:Recombinant Construct Report | Recombinant Construct Report]]
+
* [[FlyBase:JBrowse Tracks | JBrowse Tracks]]
**[[FlyBase:Reference Report | Reference Report]]
+
* [http://beta.flybase.org/cytosearrch CytoSearch]
**[[FlyBase:Sequence Feature Report | Sequence Feature Report]]
+
* [http://beta.flybase.org/featuremapper FeatureMapper]
**[[FlyBase:Strain Report | Strain Report]]
+
 
**[[FlyBase:Stock Report | Stock Report]]
+
'''Retrieve/Convert Tools Help
**[[FlyBase:Transcript Report | Transcript Report]]
+
''' *[http://beta.flybase.org/batchdownload | Batch Download]
**[[FlyBase:Vocabularies | Vocabularies Term Report]]
+
* Coordinate Converter
 +
* ID Converter
 +
* Sequence Downloader
 +
 
 +
'''RNA-Seq Tools Help
 +
'''*[[FlyBase:Tools Overview |Tools Overview]]
 +
*[http://beta.flybase.org/rnaseq/profile_search RNA-Seq Profile]
 +
*[http://beta.flybase.org/rnaseq/simsearch RNA-Seq Similarity]
 +
*[http://beta.flybase.org/rnaseq/region RNA-Seq by Region]
 +
 
 +
 
 +
'''Author Help
 +
'''
 +
*[[FlyBase:Author Guidelines | Author Guidelines]]
 +
*[[FlyBase:Personal communications to FlyBase | Personal Communications to FlyBase]]
 +
*[[FlyBase:Nomenclature | Nomenclature]]
 +
*[[FlyBase:Links to and from FlyBase | Links to and from FlyBase]]

Latest revision as of 21:50, 4 December 2017

Video Tutorials


Data Documentation

Curation Conventions

Field by Field guides to FlyBase Report Help

Computed Fields

Downloads


Tools Documentation

Query Tools Help

Genomic/Map tools Help

Retrieve/Convert Tools Help *| Batch Download

  • Coordinate Converter
  • ID Converter
  • Sequence Downloader

RNA-Seq Tools Help *Tools Overview


Author Help