Difference between revisions of "FlyBase:Stocks"

From FlyBase Wiki
Jump to navigation Jump to search
(A test edit.)
(14 intermediate revisions by 4 users not shown)
Line 1: Line 1:
 
=Popular Resource Categories=
 
=Popular Resource Categories=
−
This is a temporary test edit.
+
 
 
{|class="wikitable"
 
{|class="wikitable"
 
|-
 
|-
−
|style="text-align: center; padding: 15px;"| <big>[[FlyBase:External_Resources|All Resources]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:CRISPR|CRISPR]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:RNAi|RNAi]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Stocks|Stocks]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Model_Organism_Databases|Model Organism<br/> Databases]]</big>
+
|style="text-align: center; padding: 15px;"| <big>[[FlyBase:External_Resources|All Resources]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:CRISPR|CRISPR]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Stocks|Stocks]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:RNAi|RNAi]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Model_Organism_Databases|Model Organism<br/> Databases]]</big>
 
|-
 
|-
−
|style="text-align: center; padding: 20px;"| <big>[[FlyBase:Antibodies|Antibodies]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Images|Images]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Maps|Maps]]</big> ||style="text-align: center; padding: 20px;"| <big>[http://www.flyrnai.org/tools/protocols/web/ Protocols]</big>
+
|style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase: Antibodies|Antibodies]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Images|Images]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Maps|Maps]]</big> ||style="text-align: center; padding: 20px;"| <big>[http://www.flyrnai.org/tools/protocols/web/ Protocols]</big>
 
|}
 
|}
  
Line 16: Line 16:
 
!style="background: #efefef;"| Resource !!style="background: #efefef;"| Description !!style="background: #efefef;"| Author/Source
 
!style="background: #efefef;"| Resource !!style="background: #efefef;"| Description !!style="background: #efefef;"| Author/Source
 
|-
 
|-
−
|style="background: #efefef; white-space: nowrap;"| [http://flystocks.bio.indiana.edu/ Bloomington Drosophila Stock Center (BDSC)] ||style="background: #efefef;"| A diverse collection of stocks useful for a wide range of research applications. ||style="background: #efefef;"| Bloomington Drosophila Stock Center (BDSC)<br/> Indiana University<br/> Bloomington, IN, USA
+
|style="background: #efefef; white-space: nowrap;"| [https://bdsc.indiana.edu/ Bloomington Drosophila Stock Center (BDSC)] ||style="background: #efefef;"| A diverse collection of stocks useful for a wide range of research applications. ||style="background: #efefef;"| Bloomington Drosophila Stock Center (BDSC)<br/> Indiana University<br/> Bloomington, IN, USA
 
|-
 
|-
 
|style="white-space: nowrap;"| [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto Stock Center] || The Kyoto Stock Center collects, maintains and distributes <em>Drosophila melanogaster</em> strains for research. ||style="white-space: nowrap;"|  Kyoto Stock Center<br/> Kyoto Institute of Technology<br/> Kyoto, Japan
 
|style="white-space: nowrap;"| [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto Stock Center] || The Kyoto Stock Center collects, maintains and distributes <em>Drosophila melanogaster</em> strains for research. ||style="white-space: nowrap;"|  Kyoto Stock Center<br/> Kyoto Institute of Technology<br/> Kyoto, Japan
Line 26: Line 26:
 
|style="background: #efefef;"| [http://www.shigen.nig.ac.jp/fly/nigfly/ NIG-FLY] ||style="background: #efefef;"| NIG-RNAi stocks and TRiP Stocks for RNA interference experiments. ||style="background: #efefef;"| NIG-FLY<br/> National Institute of Genetics<br/> Mishima, Japan
 
|style="background: #efefef;"| [http://www.shigen.nig.ac.jp/fly/nigfly/ NIG-FLY] ||style="background: #efefef;"| NIG-RNAi stocks and TRiP Stocks for RNA interference experiments. ||style="background: #efefef;"| NIG-FLY<br/> National Institute of Genetics<br/> Mishima, Japan
 
|-
 
|-
−
| style="white-space: nowrap;"|[http://center.biomed.tsinghua.edu.cn/public/eq-category/modelanimalfacility/ Tsinghua Fly Center (THFC)] || Transgenic RNAi fly lines. || THFC<br/> Tsinghua University<br/> Beijing, China
+
| style="white-space: nowrap;"|[http://fly.redbux.cn/index.php?lang=en Tsinghua Fly Center (THFC)] || Transgenic RNAi fly lines. || THFC<br/> Tsinghua University<br/> Beijing, China
 
|-
 
|-
 
|style="background: #efefef;"| [http://stockcenter.vdrc.at/control/main VDRC, Vienna Drosophila RNAi Center]  ||style="background: #efefef;"| Trangenic <em>Drosophila</em> RNAi libraries, a collection of enhancer-GAL4 driver lines, the Tagged FlyFos TransgeneOme (fTRG) library. ||style="background: #efefef;"| Vienna Drosophila Resource Center (VDRC)<br/> Vienna, Austria
 
|style="background: #efefef;"| [http://stockcenter.vdrc.at/control/main VDRC, Vienna Drosophila RNAi Center]  ||style="background: #efefef;"| Trangenic <em>Drosophila</em> RNAi libraries, a collection of enhancer-GAL4 driver lines, the Tagged FlyFos TransgeneOme (fTRG) library. ||style="background: #efefef;"| Vienna Drosophila Resource Center (VDRC)<br/> Vienna, Austria
Line 38: Line 38:
 
!style="background: #efefef;"| Stock Category !!style="background: #efefef;"| Availability
 
!style="background: #efefef;"| Stock Category !!style="background: #efefef;"| Availability
 
|-
 
|-
−
|style="background: #efefef; white-space: nowrap;"| Human Disease Models ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/HD/HDintro.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/disease_ontology.html Kyoto]
+
|style="background: #efefef; white-space: nowrap;"| Human Disease Models ||style="background: #efefef;"| [https://bdsc.indiana.edu/stocks/hd/index.html BDSC], [http://kyotofly.kit.jp/stocks/documents/disease_ontology.html Kyoto]
 +
|-
 +
|Deficiencies || [https://bdsc.indiana.edu/stocks/df/index.html BDSC], [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto]
 
|-
 
|-
−
|Deficiencies || [http://flystocks.bio.indiana.edu/Browse/df/df_main.htm BDSC], [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto]
+
|style="background: #efefef;"|Insertions ||style="background: #efefef;"|[https://bdsc.indiana.edu/stocks/in/index.html BDSC], [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto], [https://drosophila.med.harvard.edu/ Harvard], [http://flypush.imgen.bcm.tmc.edu/pscreen/ GDP]
 
|-
 
|-
−
|style="background: #efefef;"|Insertions ||style="background: #efefef;"|[http://flystocks.bio.indiana.edu/Browse/in/ins_top.htm BDSC], [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto], [https://drosophila.med.harvard.edu/ Harvard], [http://flypush.imgen.bcm.tmc.edu/pscreen/ GDP]
+
|Duplications || [https://bdsc.indiana.edu/stocks/dp/index.html BDSC], [http://www.worldwidegenomics.com/duplication.html GenetiVision]
 
|-
 
|-
−
|Duplications || [http://flystocks.bio.indiana.edu/Browse/dp/dp_main.htm BDSC]
+
|style="background: #efefef;"|RNAi ||style="background: #efefef;"| [https://bdsc.indiana.edu/stocks/rnai/index.html BDSC], [http://www.shigen.nig.ac.jp/fly/nigfly/ NIG-FLY], [http://stockcenter.vdrc.at/control/library_rnai VDRC], [http://www.med.tsinghua.edu.cn/index.php/en/administration/medical-school-notice/822-20150520 THFC]
 
|-
 
|-
−
|style="background: #efefef;"|RNAi ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/RNAi/RNAihome.htm BDSC], [http://www.shigen.nig.ac.jp/fly/nigfly/ NIG-FLY], [http://stockcenter.vdrc.at/control/rnailibrary VDRC], [http://www.med.tsinghua.edu.cn/index.php/en/administration/medical-school-notice/822-20150520 THFC]
+
|GAL4 || [https://bdsc.indiana.edu/stocks/gal4/index.html BDSC], [http://kyotofly.kit.jp/stocks/documents/GAL4.html Kyoto], [http://stockcenter.vdrc.at/control/library_vt VDRC],  
 
|-
 
|-
−
|GAL4 || [http://flystocks.bio.indiana.edu/Browse/gal4/gal4_main.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/GAL4.html Kyoto], [http://stockcenter.vdrc.at/control/vtlibrary VDRC],
+
|style="background: #efefef;"|UAS ||style="background: #efefef;"| [https://bdsc.indiana.edu/stocks/uas/index.html BDSC], [http://kyotofly.kit.jp/stocks/documents/UAS.html Kyoto], [http://flyorf.ch/ FlyOrf]
 
|-
 
|-
−
|style="background: #efefef;"|UAS ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/uas/uashome.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/UAS.html Kyoto], [http://flyorf.ch/ FlyOrf]
+
|Fluors || [https://bdsc.indiana.edu/stocks/gfp/index.html BDSC], [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto]
 
|-
 
|-
−
|Fluor || [http://flystocks.bio.indiana.edu/Browse/GFP/GFPhome.htm BDSC], [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto]
+
|style="background: #efefef;"|Tagged proteins under native control ||style="background: #efefef;"| [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto], [http://stockcenter.vdrc.at/control/library_ftrg VDRC]
 
|-
 
|-
−
|style="background: #efefef;"|Tagged proteins under native control ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/GFP/GFPhome.htm BDSC], [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto], [http://stockcenter.vdrc.at/control/about_ftrg VDRC]
+
|CRISPR || [https://bdsc.indiana.edu/stocks/genome_editing/index.html BDSC], [http://www.shigen.nig.ac.jp/fly/nigfly/cas9ListAction.do NIG-FLY]
 
|-
 
|-
−
|CRISPR || [http://flystocks.bio.indiana.edu/Browse/misc-browse/CRISPR.htm BDSC], [http://www.shigen.nig.ac.jp/fly/nigfly/cas9ListAction.do NIG-FLY]
+
|style="background: #efefef;"|phiC31 ||style="background: #efefef;"|[https://bdsc.indiana.edu/stocks/phic31/index.html BDSC], [http://kyotofly.kit.jp/stocks/documents/phiC31.html Kyoto]
 
|-
 
|-
−
|style="background: #efefef;"|phiC31 ||style="background: #efefef;"|[http://flystocks.bio.indiana.edu/Browse/phiC31/phiC31home.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/phiC31.html Kyoto]
+
|FLP/FRT || [https://bdsc.indiana.edu/stocks/recombinases/index.html BDSC], [http://kyotofly.kit.jp/stocks/documents/FRT.html Kyoto]
 
|-
 
|-
−
|FRT || [http://flystocks.bio.indiana.edu/Browse/misc-browse/frt.php BDSC], [http://kyotofly.kit.jp/stocks/documents/FRT.html Kyoto]
+
|style="background: #efefef;"|Balancers ||style="background: #efefef;"| [https://bdsc.indiana.edu/stocks/balancers/index.html BDSC], [http://kyotofly.kit.jp/stocks/documents/Balancers.html Kyoto]
 
|-
 
|-
−
|style="background: #efefef;"|Balancers ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/balancers/balancer_main.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/Balancers.html Kyoto]
+
|Reference Genome strain (iso-1) || [https://bdsc.indiana.edu/Home/Search?presearch=2057 BDSC]
 
|-
 
|-
−
|Sequenced strains || [http://flystocks.bio.indiana.edu/Browse/sequenced.htm BDSC]
+
|Sequenced strains || [https://bdsc.indiana.edu/stocks/wt/dgrp.html BDSC]
 
|-
 
|-
−
|style="background: #efefef;"|Wildtype stocks ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/misc-browse/wildtype.php BDSC], [http://kyotofly.kit.jp/stocks/documents/Wild_type_stocks.html Kyoto]
+
|style="background: #efefef;"|Wildtype stocks ||style="background: #efefef;"| [https://bdsc.indiana.edu/stocks/wt/index.html BDSC], [http://kyotofly.kit.jp/stocks/documents/Wild_type_stocks.html Kyoto]
 
|-
 
|-
−
|Non-<em>melanogaster</em> <em>Drosophila</em> species || [http://kyotofly.kit.jp/stocks/documents/Other_species.html Kyoto], [https://stockcenter.ucsd.edu/index.php?table=Species&sort=location+desc DSSC]
+
|Non-<em>melanogaster</em> <em>Drosophila</em> species || [https://stockcenter.ucsd.edu/index.php?table=Species&sort=location+desc DSSC], [https://kyotofly.kit.jp/cgi-bin/ehime/photo_data_list.cgi EHIME-Fly], [http://www.shigen.nig.ac.jp/fly/kyorin/cgi-bin/index.cgi KYORIN-Fly]
 
|-
 
|-
 
|}
 
|}
Line 80: Line 82:
 
!style="background: #efefef;"| Resource !!style="background: #efefef;"| Description !!style="background: #efefef;"| Author/Source
 
!style="background: #efefef;"| Resource !!style="background: #efefef;"| Description !!style="background: #efefef;"| Author/Source
 
|-
 
|-
−
|style="background: #efefef;"| [http://www.crisprflydesign.org/flies/ CRISPR fly design] ||style="background: #efefef;"| Details of a set of Cas9 transgenic <em>D. melanogaster</em> lines [http://flystocks.bio.indiana.edu/Browse/misc-browse/CRISPR.htm available at the BDSC]. ||style="background: #efefef;"| MRC Laboratory of Molecular Biology<br /> Cambridge, UK
+
|style="background: #efefef;"| [http://www.crisprflydesign.org/flies/ CRISPR fly design] ||style="background: #efefef;"| Details of a set of Cas9 transgenic <em>D. melanogaster</em> lines [https://bdsc.indiana.edu/stocks/genome_editing/crispr_cas9.html available at the BDSC]. ||style="background: #efefef;"| MRC Laboratory of Molecular Biology<br /> Cambridge, UK
 
|-
 
|-
 
| [http://www.drosdel.org.uk/ DrosDel: An isogenic deficiency kit for Drosophila melanogaster]|| Information about isogenic deficiency lines generated by the DrosDel Project. || University of Cambridge<br/> Cambridge, UK
 
| [http://www.drosdel.org.uk/ DrosDel: An isogenic deficiency kit for Drosophila melanogaster]|| Information about isogenic deficiency lines generated by the DrosDel Project. || University of Cambridge<br/> Cambridge, UK
Line 108: Line 110:
 
!style="background: #efefef;"| Resource !!style="background: #efefef;"| Description !!style="background: #efefef;"| Author/Source
 
!style="background: #efefef;"| Resource !!style="background: #efefef;"| Description !!style="background: #efefef;"| Author/Source
 
|-
 
|-
−
|style="background: #efefef; white-space: nowrap;"| [https://kyotofly.kit.ac.jp/cgi-bin/ehime/index.cgi EHIME-Fly]||style="background: #efefef;"| Wild type stocks of <em>Drosophila</em> species that have been recorded in Japan. EHIME-Fly maintains and distributes over 130 species, represented by approximately 1450 stocks. ||style="background: #efefef; white-space: nowrap;"| Ehime University<br/> Matsuyama, Ehime, Japan
+
|style="background: #efefef; white-space: nowrap;"| [https://kyotofly.kit.jp/cgi-bin/ehime/photo_data_list.cgi EHIME-Fly]||style="background: #efefef;"| Wild type stocks of <em>Drosophila</em> species that have been recorded in Japan. EHIME-Fly maintains and distributes over 130 species, represented by approximately 1450 stocks. ||style="background: #efefef; white-space: nowrap;"| Ehime University<br/> Matsuyama, Ehime, Japan
 
|-
 
|-
 
| [https://stockcenter.ucsd.edu/info/welcome.php DSSC, Drosophila Species Stock Center] || The DSSC maintains a living collection of over 250 <em>Drosophila</em> species represented by approximately 1600 stocks. || University of California San Diego<br/> San Diego, CA, USA
 
| [https://stockcenter.ucsd.edu/info/welcome.php DSSC, Drosophila Species Stock Center] || The DSSC maintains a living collection of over 250 <em>Drosophila</em> species represented by approximately 1600 stocks. || University of California San Diego<br/> San Diego, CA, USA

Revision as of 22:16, 2 January 2018

Popular Resource Categories

All Resources CRISPR Stocks RNAi Model Organism
Databases
Neuroscience Antibodies Images Maps Protocols

D. melanogaster Stock Collections

Resource Description Author/Source
Bloomington Drosophila Stock Center (BDSC) A diverse collection of stocks useful for a wide range of research applications. Bloomington Drosophila Stock Center (BDSC)
Indiana University
Bloomington, IN, USA
Kyoto Stock Center The Kyoto Stock Center collects, maintains and distributes Drosophila melanogaster strains for research. Kyoto Stock Center
Kyoto Institute of Technology
Kyoto, Japan
Exelixis The Exelixis Collection of transgenic insertion stocks at Harvard Medical School. Harvard Medical School
Boston, MA, USA
FlyORF Well characterized transgenic UAS-ORF lines. Approximately 2,400 fly stocks comprising about 1900 genes, generated using the phiC31 integrase method. FlyORF
University of Zurich
Zurich, Switzerland
NIG-FLY NIG-RNAi stocks and TRiP Stocks for RNA interference experiments. NIG-FLY
National Institute of Genetics
Mishima, Japan
Tsinghua Fly Center (THFC) Transgenic RNAi fly lines. THFC
Tsinghua University
Beijing, China
VDRC, Vienna Drosophila RNAi Center Trangenic Drosophila RNAi libraries, a collection of enhancer-GAL4 driver lines, the Tagged FlyFos TransgeneOme (fTRG) library. Vienna Drosophila Resource Center (VDRC)
Vienna, Austria


D. melanogaster Stock Collections by Specific Category

Stock Category Availability
Human Disease Models BDSC, Kyoto
Deficiencies BDSC, Kyoto
Insertions BDSC, Kyoto, Harvard, GDP
Duplications BDSC, GenetiVision
RNAi BDSC, NIG-FLY, VDRC, THFC
GAL4 BDSC, Kyoto, VDRC,
UAS BDSC, Kyoto, FlyOrf
Fluors BDSC, Kyoto
Tagged proteins under native control Kyoto, VDRC
CRISPR BDSC, NIG-FLY
phiC31 BDSC, Kyoto
FLP/FRT BDSC, Kyoto
Balancers BDSC, Kyoto
Reference Genome strain (iso-1) BDSC
Sequenced strains BDSC
Wildtype stocks BDSC, Kyoto
Non-melanogaster Drosophila species DSSC, EHIME-Fly, KYORIN-Fly


D. melanogaster Stock Collection Informational Sites

Resource Description Author/Source
CRISPR fly design Details of a set of Cas9 transgenic D. melanogaster lines available at the BDSC. MRC Laboratory of Molecular Biology
Cambridge, UK
DrosDel: An isogenic deficiency kit for Drosophila melanogaster Information about isogenic deficiency lines generated by the DrosDel Project. University of Cambridge
Cambridge, UK
Drososhare An internet platform to provide and request flies to/from other scientists in a peer to peer fashion. Synonyms listed in FlyBase are used during the fly stock query process. Drososhare GmbH
Schillerpromenade 4
12049 Berlin
Flytrap Project Information about GFP protein trap lines from the FlyTrap project. Yale University
New Haven, CT, USA
Gene Disruption Project (GDP) Information about insertion lines produced by the Gene Disruption Project (GDP). Baylor College of Medicine
Houston, TX, USA
GDP MiMIC RMCE Lines Information about MiMIC RMCE Lines from the Gene Disruption Project. Baylor College of Medicine
Houston, TX, USA
GDP Transposon Schematics Schematic illustrations of transposons featured in the Gene Disruption Project database. Baylor College of Medicine
Houston, TX, USA
Ehime University fly species photographs Photographs of 102 species of Drosophila stocks at Ehime University. Ehime University
Matsuyama, Ehime, Japan
Drosophila Genetic Reference Panel (DGRP) Details regarding the DGRP lines available at the BDSC. Includes a general summary and links to informative websites and references. Human Genome Sequencing Center
Baylor College of Medicine
Houston, TX, USA
Janelia FlyLight Project Large anatomical data sets and highly characterized collections of GAL4, LexA and Split-GAL4 drivers to enable the visualization and precise manipulation of individual cell types in the adult and larval Drosophila nervous systems. Stocks are available at the BDSC. Janelia Research Campus
Ashburn, VA, USA


Drosophila Species Collections

Resource Description Author/Source
EHIME-Fly Wild type stocks of Drosophila species that have been recorded in Japan. EHIME-Fly maintains and distributes over 130 species, represented by approximately 1450 stocks. Ehime University
Matsuyama, Ehime, Japan
DSSC, Drosophila Species Stock Center The DSSC maintains a living collection of over 250 Drosophila species represented by approximately 1600 stocks. University of California San Diego
San Diego, CA, USA
KYORIN-Fly Mutant and wild type stocks of Drosophila species, especially the Drosophila ananassae species subgroup, D. auraria complex, and D. hydei. Kyorin University
Shinkawa, Mitaka, Tokyo, Japan



  Back to top. | Back to All Resources Page. | Provide Feedback.

Retrieved from "https://wiki.flybase.org/mediawiki/index.php?title=FlyBase:Stocks&oldid=169610"