Difference between revisions of "FlyBase:Resources"

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=Model Organisms=
 
{| class="wikitable" border="1"
 
|-
 
! Database
 
! Organism
 
! Organism (Genus and species)
 
|-
 
| [http://hymenopteragenome.org/beebase/ BeeBase]
 
| Honey Bee
 
| Apis mellifera
 
|-
 
| [http://beetlebase.org/ BeetleBase]
 
| Red Flour Beetle
 
| Tribolium castaneum
 
|-
 
| [http://dictybase.org/ DictyBase]
 
| Soil Amoeba
 
| Dictyostelium discoideum
 
|-
 
| [http://ecocyc.org/ EcoCyc]
 
| Bacteria
 
| Escherichia coli
 
|-
 
| [http://www.gramene.org/ Gramene]
 
| Grasses
 
|
 
|-
 
| [http://www.informatics.jax.org/ MGI]
 
| Mouse
 
| Mus musculus
 
|-
 
| [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=OMIM/ OMIM]
 
| Human
 
| Homo sapiens
 
|-
 
| [http://www.yeastgenome.org// SGD]
 
| Budding Yeast
 
| Saccharomyces cerevisiae
 
|-
 
| [http://www.genedb.org/genedb/pombe/index.jsp S. pombe GeneDB]
 
| Fission Yeast
 
| Schizosaccharomyces pombe
 
|-
 
| [http://www.arabidopsis.org/ TAIR]
 
| Mouse-ear cress
 
| Arabidopsis thaliana
 
|-
 
| [http://www.vectorbase.org/index.php VectorBase]
 
| Mosquitos and Deer Tick
 
| Anopheles gambiae, Aedes aegypti, Culex pipiens quinquefasciatus, Ixodes scapularis
 
|-
 
| [http://www.wormbase.org/ WormBase]
 
| Round worms
 
| Caenorhabditis
 
|-
 
| [http://zfin.org/cgi-bin/webdriver?MIval=aa-ZDB_home.apg ZFIN]
 
| Zebrafish
 
| Danio rerio
 
|}
 
  
=Related Projects=
 
:[http://www.gmod.org/ GMOD]
 
:[http://www.geneontology.org/ Gene Ontology (GO)]
 
:[http://www.genomeknowledge.org/ Reactome]
 
:[http://www.fruitfly.org/ BDGP (Berkeley Drosophila Genome Project)]
 
:[http://dgrc.cgb.indiana.edu/ DGRC (Drosophila Genomics Resource Center)]
 
:[http://www.ou.edu/journals/dis/byissue.html DIS by issue]
 
:[http://www.flyexpress.net/ FlyExpress]
 
:[http://www.sdbonline.org/fly/aimain/1aahome.htm Interactive Fly]
 
:[http://www.modencode.org/ modENCODE]
 
:[http://www.textpresso.org/fly/ Textpresso for Fly]
 
 
=Stock Collections=
 
===''D. melanogaster'' Collections===
 
:[http://flystocks.bio.indiana.edu/ Bloomington]
 
:[http://www.drosdel.org.uk/ DrosDel]
 
:[http://drosophila.med.harvard.edu/ Exelixis (Harvard)]
 
:[http://flypush.imgen.bcm.tmc.edu/pscreen/ GDP (Baylor)]
 
:[http://www.dgrc.kit.ac.jp/ Kyoto]
 
:[http://www.shigen.nig.ac.jp/fly/nigfly/ NIG-Fly]
 
:[http://stockcenter.vdrc.at/control/main VDRC]
 
 
===Species Collections===
 
:[http://kyotofly.kit.jp/cgi-bin/ehime/index.cgi Ehime]
 
:[https://stockcenter.ucsd.edu/info/welcome.php UC San Diego]
 
 
===Other public collections===
 
:'''Drosophila Gene Search Project'''
 
:Information about ordering P{GS} lines can be found at http://gsdb.biol.metro-u.ac.jp/~dclust/index.html
 
 
:'''Ehime Drosophila Species Stock Center of Japan'''
 
:A collection of wild-type strains of D. melanogaster and strains of some 30 species can be found at http://kyotofly.kit.ac.jp/ehime/
 
 
:'''FlyTrap Stock Collection'''
 
:GFP protein trap lines from the FlyTrap project can be obtained at Yale University, USA at http://flytrap.med.yale.edu/
 
 
:'''FlyView Stock Collection'''
 
:Enhancer trap lines from the FlyView project can be obtained at University of Muenster, Germany at http://flyview.uni-muenster.de/
 
 
:'''Kyorin-Fly'''
 
:A collection of mutant and wildtype stocks of Drosophila species, especially the Drosophila ananassae species subgroup, D. auraria complex, and D. hydei. http://kyotofly.kit.jp/cgi-bin/kyorin/index.cgi
 
 
:'''Tübingen Drosophila Stock Collection'''
 
:A list of approximately 2,000 Drosophila stocks at the Max-Planck-Institute for Developmental Biology.
 
 
:'''UC San Diego Drosophila Stock Center'''
 
:Approximately 270 different Drosophila species at University of San Diego, USA can be obtained at https://stockcenter.ucsd.edu/info/welcome.php
 
 
:'''University of Cambridge FlyProt project'''
 
:Annotations, expression patterns and sequence data for the YFP protein trap lines from the FlyProt project can be viewed on the Flannotator at http://www.flyprot.org. Stocks are available from the Kyoto Stock Center.
 
 
=Vectors and Constructs=
 
http://flybase.org/static_pages/lists/vectors.html
 
 
=Listing of all resources=
 
===Drosophila Network Resources===
 
 
===Drosophila Material Resources===
 
 
 
[[Category:Public Resources]]
 

Latest revision as of 17:34, 13 February 2014