FlyBase:Neuroscience
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Popular Resource Categories
All Resources | CRISPR | ScRNA-Seq | RNAi | Stocks | Antibodies | Neuroscience |
Model Organism Databases |
Images | Maps | Protocols | Papers with Technical Advances |
Gene Set Enrichment Tools |
Databases of expression, anatomy and physiology
Resource | Description | Author/Source |
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FlyLight GAL4 and LexA lines | Database of expression patterns of GAL4 and LexA driver lines from Janelia Research Campus | Janelia FlyLight Project Team Gerry Rubin Lab James Truman Lab Richard Mann Lab Chris Doe Lab Janelia Research Campus Virginia, USA |
FlyLight Split GAL4 lines | Database of expression patterns of Split GAL4 lines from Janelia Research Campus | Janelia FlyLight Project Team Gerry Rubin Lab Janelia Research Campus Virginia, USA |
Fly Trap | Database of classical P(GAL4) enhancer traps imaged in head sections | Armstrong Lab University of Edinburgh Edinburgh, UK |
DoOR | Database of odorant responses in Drosophila | Munch and Galizia, 2016 |
NeuroMorpho | Curated inventory of digitally reconstructed neurons associated with peer-reviewed publications | Ascoli et al., 2007 |
Insect Brain Database | Database of single neurons and brains for several insect species | Uwe Homberg Lab Randolf Menzel Lab Marie Dacke/Basil el Jundi Labs Bente Berg Lab Stanley Heinze Lab |
For viewing, analysing and querying images
Resource | Description | Author/Source |
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Virtual Fly Brain | Interactive tool for neurobiologists to explore the detailed neuroanatomy, neuron connectivity and gene expression of Drosophila melanogaster | Milyaev et al., 2012 |
Bridging registrations | This site provides the tools to transform image data from one template brain (adult Drosophila) to another, using a bridging registration. | Manton et al., 2014 |
NBLAST | Tool to search for similar neurons by morphology and location | Costa et al., 2014 |
Interactive maps
Resource | Description | Author/Source |
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Embryonic and larval neuroblasts and lineages | Interactive maps of the embryonic and larval neuroblasts and lineages | Christof Rickert University of Mainz Mainz, Germany |
FlyPNS | Description of embryonic and larval sensory organs of D. melanogaster in abdominal segments A1-A7 | Orgogozo and Grueber, 2005 |
Nomenclature and protocols
Resource | Description | Author/Source |
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BrainName | Standard nomenclature of the adult brain | Ito et al., 2014 |
Immunostaining of adult brains | This protocol describes the dissection, staining, and imaging of adult brains from Drosophila with mosaic labeling | Ostrovsky et al., 2013 |
Image registration of adult brains | This protocol describes the practical steps required for an intensity-based nonlinear registration of the Drosophila brain using the staining for the presynaptic marker Bruchpilot (nc82) | Ostrovsky et al., 2013 |
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