Difference between revisions of "FlyBase:Help"

From FlyBase Wiki
Jump to navigation Jump to search
(42 intermediate revisions by 3 users not shown)
Line 4: Line 4:
 
=FlyBase Help=
 
=FlyBase Help=
  
−
====Tools====
+
==[[FlyBase:FlyBase Help Index | FlyBase Help Index]]==
 +
 
 +
==Tools==
 
* [[FlyBase:Tools Overview|Tools Overview]]
 
* [[FlyBase:Tools Overview|Tools Overview]]
 
* [[FlyBase:GBrowse|FlyBase GBrowse Help]]
 
* [[FlyBase:GBrowse|FlyBase GBrowse Help]]
 
* [[FlyBase:GBrowse Tracks|GBrowse Tracks]]
 
* [[FlyBase:GBrowse Tracks|GBrowse Tracks]]
 +
* [[FlyBase:JBrowse|FlyBase JBrowse Help]]
 +
* [[FlyBase:JBrowse Tracks|JBrowse Tracks]]
  
−
====Downloads====
+
==Downloads==
 
* [[FlyBase:Downloads Overview|Downloads Overview]]
 
* [[FlyBase:Downloads Overview|Downloads Overview]]
−
* [http://{{SERVERNAME}}/static_pages/downloads/bulkdata7.html Precomputed data files for the current release]
+
* [http://flybase.org/cgi-bin/get_static_page.pl?file=bulkdata7.html&title=Current%20Release Precomputed data files for the current release]
−
* [http://{{SERVERNAME}}/static_pages/downloads/archivedata3.html Archived data files for recent releases]
+
* [http://flybase.org/cgi-bin/get_static_page.pl?file=archivedata3.html&title=Archived%20Releases Archived data files for recent releases]
−
* [http://{{SERVERNAME}}/static_pages/downloads/current/map_conversion/cyto-genetic-seq.tsv Map Conversion]
+
* [[Media:DmelMapTable.160615c.xlsx | Map conversion]]
 
:'''FTP site'''
 
:'''FTP site'''
−
::*[ftp://ftp.flybase.net/releases/ Index of releases]
+
::*[ftp://ftp.flybase.org/releases/ Index of releases]
−
::*[ftp://ftp.flybase.net/genomes/ Index of Genomes]
+
::*[ftp://ftp.flybase.org/genomes/ Index of Genomes]
  
−
====Links====
+
==Links==
 
* [[FlyBase:External Resources|All External Resources]]
 
* [[FlyBase:External Resources|All External Resources]]
 
** [[FlyBase:Drosophila Network Resources|Drosophila Network Resources]]
 
** [[FlyBase:Drosophila Network Resources|Drosophila Network Resources]]
 
** [[FlyBase:Drosophila Material Resources|Drosophila Material Resources (Reagents)]]
 
** [[FlyBase:Drosophila Material Resources|Drosophila Material Resources (Reagents)]]
 
** [[FlyBase:CRISPR|CRISPR links page]]
 
** [[FlyBase:CRISPR|CRISPR links page]]
 +
** [[FlyBase:Stocks|Stocks links page]]
 
** [[FlyBase:RNAi|RNAi links page]]
 
** [[FlyBase:RNAi|RNAi links page]]
−
** [[FlyBase:Stocks|Stocks links page]]
+
** [[FlyBase:Model Organism Databases|Model Organism Databases links page]]
 +
** [[FlyBase:Neuroscience|Neuroscience links page]]
 
** [[FlyBase:Antibodies|Antibodies links page]]
 
** [[FlyBase:Antibodies|Antibodies links page]]
−
* [[FlyBase:Model Organism Databases|Model Organism Databases]]
+
** [[FlyBase:Images|Images links page]]
 +
** [[FlyBase:Maps|Maps links page]]
 +
** [http://www.flyrnai.org/tools/protocols/web/| DRSC Protocols page]
 
*[[FlyBase:Funding|Funding]]
 
*[[FlyBase:Funding|Funding]]
 +
*[http://www.alliancegenome.org Alliance of Genome Resources]
 
*[http://www.fruitfly.org/ BDGP]
 
*[http://www.fruitfly.org/ BDGP]
 
*[https://dgrc.cgb.indiana.edu/Home DGRC]
 
*[https://dgrc.cgb.indiana.edu/Home DGRC]
Line 36: Line 45:
 
*[http://www.textpresso.org/fly/ Textpresso for Fly]
 
*[http://www.textpresso.org/fly/ Textpresso for Fly]
  
−
====Community====
+
==Community==
  
−
* [http://{{SERVERNAME}}/submission/publication/ Fast Track Your Paper]
+
* [http://flybase.org/submission/publication/ Fast Track Your Paper]
 
* [[FlyBase:Community Advisory Group| FlyBase Community Advisory Group]]
 
* [[FlyBase:Community Advisory Group| FlyBase Community Advisory Group]]
 
* [https://groups.google.com/forum/#!forum/flybase FlyBase Forum]
 
* [https://groups.google.com/forum/#!forum/flybase FlyBase Forum]
−
* [http://{{SERVERNAME}}/static_pages/people/people_query6.html Find A Person]
+
* [http://flybase.org/static_pages/people/people_query6.html Find A Person]
−
* [http://{{SERVERNAME}}/static_pages/news/newsletter.html Newsletter]
+
* [http://flybase.org/static_pages/news/newsletter.html FlyBase Newsletter]
 
* [http://www.bio.net/hypermail/dros/ bionet.dros]
 
* [http://www.bio.net/hypermail/dros/ bionet.dros]
−
* [http://{{SERVERNAME}}/wiki/Category:Genes FlyGene Wiki]
+
* [http://flybase.org/wiki/Category:Genes FlyGene Wiki]
 +
* [[FlyBase:Gene_Snapshots| Gene Snapshots]]
 
* [https://twitter.com/FlyBaseDotOrg Twitter (@FlyBaseDotOrg)]
 
* [https://twitter.com/FlyBaseDotOrg Twitter (@FlyBaseDotOrg)]
  
−
====Species====
+
==Species==
 
* [[FlyBase:Phylogeny|Phylogeny]]
 
* [[FlyBase:Phylogeny|Phylogeny]]
−
* [http://{{SERVERNAME}}/static_pages/species/sequenced_species.html Sequenced Species]
+
* [http://flybase.org/static/sequenced_species Original 12 Sequenced Drosophila Species]
−
* [http://{{SERVERNAME}}/maps/chromosomes/synteny_table.html Synteny Table]
+
* [http://flybase.org/maps/synteny Synteny Table for Original 12 Sequenced Drosophila Species]
−
* [http://{{SERVERNAME}}/static_pages/anatomy/Drosophilidae/Drosophilidae.html Color Illustrations]
+
* [http://flybase.org/static/Drosophilidae Color Illustrations of more than 100 Drosophila Species]
 
* [[FlyBase:Abbreviations|Abbreviations]]
 
* [[FlyBase:Abbreviations|Abbreviations]]
  
−
====About FlyBase====
+
==About FlyBase==
−
 
+
* [http://flybase.org/cgi-bin/get_static_page.pl?file=release_notes.html&title=Release%20Notes Release Notes]
−
* [http://{{SERVERNAME}}/static_pages/docs/release_notes.html Release Notes]
+
* [http://flybase.org/static/new-this-release New in Release]
−
* [http://{{SERVERNAME}}/static_pages/docs/new_this_release.html New in Release]
+
* [http://flybase.org/static/release_schedule Release Schedule]
−
* [http://{{SERVERNAME}}/static_pages/docs/release_schedule.html Release Schedule]
 
 
* [[FlyBase:FlyBase Positions| FlyBase Positions]]
 
* [[FlyBase:FlyBase Positions| FlyBase Positions]]
 
* [[FlyBase:About#Citing_FlyBase| Citing FlyBase]]
 
* [[FlyBase:About#Citing_FlyBase| Citing FlyBase]]
Line 65: Line 74:
 
* [[FlyBase:About#FlyBase_Support| FlyBase Support]]
 
* [[FlyBase:About#FlyBase_Support| FlyBase Support]]
  
−
====Help====
+
==Help==
−
 
+
* [https://www.youtube.com/channel/UCG-KSNq46vkezAwbrVQojYA/videos FlyBase Video Tutorials]
−
* [[FlyBase:FAQ|FAQs]]
+
* [[FlyBase:FlyBase Help Index#Report Help | Field-by-field guides to FlyBase reports]]
−
* [https://www.youtube.com/user/FlyBaseDB FlyBase video tutorials]
 
−
* [[FlyBase:Report Help|Field-by-field guides to FlyBase reports]]
 
 
* [[FlyBase:Controlled vocabularies used by FlyBase|Controlled vocabularies used by FlyBase]]
 
* [[FlyBase:Controlled vocabularies used by FlyBase|Controlled vocabularies used by FlyBase]]
 
* [[FlyBase:Author Guidelines|Author Guidelines]]
 
* [[FlyBase:Author Guidelines|Author Guidelines]]
Line 75: Line 82:
 
* [[FlyBase:FlyBase Guides: Pamphlets and Powerpoints|FlyBase pamphlets, powerpoints and posters]]
 
* [[FlyBase:FlyBase Guides: Pamphlets and Powerpoints|FlyBase pamphlets, powerpoints and posters]]
 
* [[FlyBase:New to Flies?|Useful links if you are new to Flies]]
 
* [[FlyBase:New to Flies?|Useful links if you are new to Flies]]
−
* [http://{{SERVERNAME}}/cgi-bin/mailto-fbhelp.html Contact FlyBase]
+
* [http://contact/email Contact FlyBase]
−
* [http://{{SERVERNAME}}/static_pages/search/site_search.html Google<sup>TM</sup> FlyBase]
 
 
* [[FlyBase:Vectors and Constructs|Commonly used vectors and constructs]]
 
* [[FlyBase:Vectors and Constructs|Commonly used vectors and constructs]]
 +
* [[FlyBase:FAQ|FAQs]]
  
−
====Documentation====
+
==FlyBase Report Help==
  
 
'''FlyBase Report Help and Documentation'''
 
'''FlyBase Report Help and Documentation'''
  
−
*[[FlyBase:Report Help|Field-by-field guides to FlyBase reports]]
+
* [[FlyBase:FlyBase Help Index#Report Help | Field-by-field guides to FlyBase reports]]
 +
 
 +
==Documentation==
  
 
'''Nomenclature'''
 
'''Nomenclature'''
Line 109: Line 118:
 
*[[FlyBase:RefMan F.|Instructions for creating links to and from FlyBase]]
 
*[[FlyBase:RefMan F.|Instructions for creating links to and from FlyBase]]
  
−
====News====
+
==General==
  
−
* [[FlyBase:FlyBase News|FlyBase News]]
 
−
* [[FlyBase:Meetings|Meetings]]
 
−
* [[FlyBase:Courses|Courses]]
 
−
 
−
====General====
 
−
 
−
* [[FlyBase:Zotero support in FlyBase|Zotero support in FlyBase]]
 
 
* [[FlyBase:Fly Board|Fly Board and White Papers]]
 
* [[FlyBase:Fly Board|Fly Board and White Papers]]
−
 
  
 
[[Category:Help]]
 
[[Category:Help]]

Revision as of 22:49, 19 December 2017


FlyBase Help

FlyBase Help Index

Tools

Downloads

FTP site

Links

Community

Species

About FlyBase

Help

FlyBase Report Help

FlyBase Report Help and Documentation

Documentation

Nomenclature

Gene Model Annotation

GO Annotation

Computed Fields

Links to and from FlyBase

General

Retrieved from "https://wiki.flybase.org/mediawiki/index.php?title=FlyBase:Help&oldid=169514"