Difference between revisions of "FlyBase:Help"

From FlyBase Wiki
Jump to navigation Jump to search
Line 1: Line 1:
−
__TOC__
+
====Tools====
−
 
 
−
 
 
−
=FlyBase Help=
 
−
 
 
−
==Tools==
 
 
* [[FlyBase:Tools Overview|Tools Overview]]
 
* [[FlyBase:Tools Overview|Tools Overview]]
 
* [[FlyBase:GBrowse|FlyBase GBrowse Help]]
 
* [[FlyBase:GBrowse|FlyBase GBrowse Help]]
 
* [[FlyBase:GBrowse Tracks|GBrowse Tracks]]
 
* [[FlyBase:GBrowse Tracks|GBrowse Tracks]]
  
−
==Downloads==
+
====Downloads====
 
* [[FlyBase:Downloads Overview|Downloads Overview]]
 
* [[FlyBase:Downloads Overview|Downloads Overview]]
 
* [http://{{SERVERNAME}}/static_pages/downloads/bulkdata7.html Precomputed data files for the current release]
 
* [http://{{SERVERNAME}}/static_pages/downloads/bulkdata7.html Precomputed data files for the current release]
Line 18: Line 13:
 
::*[ftp://ftp.flybase.net/genomes/ Index of Genomes]
 
::*[ftp://ftp.flybase.net/genomes/ Index of Genomes]
  
−
==Links==
+
====Links====
−
* [[FlyBase:External Resources|All External Resources]]
+
* [[FlyBase:All Resources|All Resources]]
 
** [[FlyBase:Drosophila Network Resources|Drosophila Network Resources]]
 
** [[FlyBase:Drosophila Network Resources|Drosophila Network Resources]]
−
** [[FlyBase:Drosophila Material Resources|Drosophila Material Resources (Reagents)]]
+
** [[FlyBase:Drosophila Material Resources|Drosophila Material Resouces (Reagents)]]
−
** [[FlyBase:CRISPR|CRISPR links page]]
 
−
** [[FlyBase:RNAi|RNAi links page]]
 
−
** [[FlyBase:Stocks|Stocks links page]]
 
−
** [[FlyBase:Antibodies|Antibodies links page]]
 
 
* [[FlyBase:Model Organism Databases|Model Organism Databases]]
 
* [[FlyBase:Model Organism Databases|Model Organism Databases]]
 +
* [[FlyBase:Stock Collections|Stock Collections]]
 
*[[FlyBase:Funding|Funding]]
 
*[[FlyBase:Funding|Funding]]
 
*[http://www.fruitfly.org/ BDGP]
 
*[http://www.fruitfly.org/ BDGP]
Line 36: Line 28:
 
*[http://www.textpresso.org/fly/ Textpresso for Fly]
 
*[http://www.textpresso.org/fly/ Textpresso for Fly]
  
−
==Community==
+
====Community====
  
 
* [http://{{SERVERNAME}}/submission/publication/ Fast Track Your Paper]
 
* [http://{{SERVERNAME}}/submission/publication/ Fast Track Your Paper]
Line 47: Line 39:
 
* [https://twitter.com/FlyBaseDotOrg Twitter (@FlyBaseDotOrg)]
 
* [https://twitter.com/FlyBaseDotOrg Twitter (@FlyBaseDotOrg)]
  
−
==Species==
+
====Species====
 
* [[FlyBase:Phylogeny|Phylogeny]]
 
* [[FlyBase:Phylogeny|Phylogeny]]
 
* [http://{{SERVERNAME}}/static_pages/species/sequenced_species.html Sequenced Species]
 
* [http://{{SERVERNAME}}/static_pages/species/sequenced_species.html Sequenced Species]
Line 54: Line 46:
 
* [[FlyBase:Abbreviations|Abbreviations]]
 
* [[FlyBase:Abbreviations|Abbreviations]]
  
−
==About FlyBase==
+
====About====
 +
 
 
* [http://{{SERVERNAME}}/static_pages/docs/release_notes.html Release Notes]
 
* [http://{{SERVERNAME}}/static_pages/docs/release_notes.html Release Notes]
 
* [http://{{SERVERNAME}}/static_pages/docs/new_this_release.html New in Release]
 
* [http://{{SERVERNAME}}/static_pages/docs/new_this_release.html New in Release]
Line 64: Line 57:
 
* [[FlyBase:About#FlyBase_Support| FlyBase Support]]
 
* [[FlyBase:About#FlyBase_Support| FlyBase Support]]
  
−
==Help==
+
====Help====
 +
 
 
* [[FlyBase:FAQ|FAQs]]
 
* [[FlyBase:FAQ|FAQs]]
−
* [https://www.youtube.com/user/FlyBaseDB FlyBase video tutorials]
+
* [[FlyBase:FlyBase Guides: Pamphlets and Powerpoints|FlyBase Guides: Pamphlets, Powerpoints and Posters]]
−
* [[FlyBase:Report Help|Field-by-field guides to FlyBase reports]]
+
* [https://www.youtube.com/user/FlyBaseDB Video Tutorials]
−
* [[FlyBase:Controlled vocabularies used by FlyBase|Controlled vocabularies used by FlyBase]]
+
* [[FlyBase:Report Help|Report Help]]
 
* [[FlyBase:Author Guidelines|Author Guidelines]]
 
* [[FlyBase:Author Guidelines|Author Guidelines]]
−
* [[FlyBase:Personal communications to FlyBase|Personal communications to FlyBase]]
 
−
* [[FlyBase:FlyBase Guides: Pamphlets and Powerpoints|FlyBase pamphlets, powerpoints and posters]]
 
−
* [[FlyBase:New to Flies?|Useful links if you are new to Flies]]
 
 
* [http://{{SERVERNAME}}/cgi-bin/mailto-fbhelp.html Contact FlyBase]
 
* [http://{{SERVERNAME}}/cgi-bin/mailto-fbhelp.html Contact FlyBase]
 +
* [[FlyBase:New to Flies?|New to Flies?]]
 
* [http://{{SERVERNAME}}/static_pages/search/site_search.html Google<sup>TM</sup> FlyBase]
 
* [http://{{SERVERNAME}}/static_pages/search/site_search.html Google<sup>TM</sup> FlyBase]
−
* [[FlyBase:Vectors and Constructs|Commonly used vectors and constructs]]
 
  
−
==Documentation==
+
:'''Documentation'''
 +
 
 +
::'''Curation'''
 +
 
 +
:::* [[FlyBase:Controlled vocabularies used by FlyBase |Controlled Vocabularies used by FlyBase]]
 +
:::* [[FlyBase:Nontraditional alleles |Nontraditional alleles]]
  
−
'''FlyBase Report Help and Documentation'''
+
::'''Gene Model Annotation'''
  
−
*[[FlyBase:Report Help|Field-by-field guides to FlyBase reports]]
+
:::* [[FlyBase:Gene Model Annotation Guidelines|Gene Model Annotation Guidelines (2012)]]
 +
:::* [[FlyBase:Gene_Model_Annotation_Guidelines#G.7._Gene_Model_Annotation_Guidelines_.282007.29|Gene Model Annotation Guidelines (2007)]]
 +
:::* [[FlyBase:Annotation Evidence Score|What does the annotation evidence score mean?]]
  
−
'''Nomenclature'''
+
::'''GO Annotation'''
  
−
*[[FlyBase:Nomenclature|Nomenclature Guidelines]]
+
:::* [[FlyBase:Gene Ontology (GO) Annotation |Classification of Gene Products using Gene Ontology (GO) terms]]
−
*[[FlyBase:Nontraditional alleles |Nontraditional alleles]]
 
  
−
'''Gene Model Annotation'''
+
::* [[FlyBase:Nomenclature|Nomenclature]]
  
−
*[[FlyBase:Gene Model Annotation Guidelines|Gene Model Annotation Guidelines (2012)]]
+
::* [[FlyBase:Vectors and Constructs|Vectors and Constructs]]
−
*[[FlyBase:Gene_Model_Annotation_Guidelines#G.7._Gene_Model_Annotation_Guidelines_.282007.29|Gene Model Annotation Guidelines (2007)]]
 
−
*[[FlyBase:Annotation Evidence Score|What does the annotation evidence score mean?]]
 
  
−
'''GO Annotation'''
+
::'''Computed Fields'''
  
−
*[[FlyBase:Gene Ontology (GO) Annotation |Classification of Gene Products using Gene Ontology (GO) terms]]
+
:::* [[FlyBase:Computed Feature type of genes | Computed Feature type of genes]]
 +
:::* [[FlyBase:Computed cytological data | Computed cytological data]]
  
−
'''Computed Fields'''
+
::* [[FlyBase:Personal communications to FlyBase |Personal communications to FlyBase]]
  
−
*[[FlyBase:Computed Feature type of genes | Computed Feature type of genes]]
+
::* [[FlyBase:RefMan F.|Links to and from FlyBase]]
−
*[[FlyBase:Computed cytological data | Computed cytological data]]
 
  
−
'''Links to and from FlyBase'''
+
====News====
  
−
*[[FlyBase:RefMan F.|Instructions for creating links to and from FlyBase]]
+
* [[FlyBase:FlyBase News|FlyBase News]]
 +
* [[FlyBase:Meetings|Meetings]]
 +
* [[FlyBase:Courses|Courses]]
  
−
==General==
+
====General====
  
 
* [[FlyBase:Zotero support in FlyBase|Zotero support in FlyBase]]
 
* [[FlyBase:Zotero support in FlyBase|Zotero support in FlyBase]]

Revision as of 19:51, 15 March 2016

Tools

Downloads

FTP site

Links

Community

Species

About

Help

Documentation
Curation
Gene Model Annotation
GO Annotation
Computed Fields

News

General

Retrieved from "https://wiki.flybase.org/mediawiki/index.php?title=FlyBase:Help&oldid=133002"