Difference between revisions of "FlyBase:FlyBase Help Index"
Jump to navigation
Jump to search
| (One intermediate revision by the same user not shown) | |||
| Line 46: | Line 46: | ||
*[[FlyBase:Vocabularies | CV (Controlled Vocabulary) Term Report]] | *[[FlyBase:Vocabularies | CV (Controlled Vocabulary) Term Report]] | ||
*[[FlyBase:Dataset-Collection Report | Dataset/Collection Report]] | *[[FlyBase:Dataset-Collection Report | Dataset/Collection Report]] | ||
| + | *[[FlyBase:Experimental Tool | Experimental Tool Report]] | ||
*[[FlyBase:Gene Report | Gene Report]] | *[[FlyBase:Gene Report | Gene Report]] | ||
*[[FlyBase:Gene Group Report | Gene Group Report]] | *[[FlyBase:Gene Group Report | Gene Group Report]] | ||
| Line 85: | Line 86: | ||
*[[FlyBase:Vocabularies Tool | Vocabularies Tool]] | *[[FlyBase:Vocabularies Tool | Vocabularies Tool]] | ||
| − | '''Genomic/Map | + | '''Genomic/Map Tools Help |
''' | ''' | ||
* BLAST | * BLAST | ||
Revision as of 20:29, 20 March 2019
Video Tutorials
- FlyBase Video Tutorials on YouTube organized into four playlists.
Basic navigation series
- How to find all data related to a gene
- How to generate an excel file of all alleles of a gene
- Finding related genes in FlyBase: Gene Groups
- Finding related genes/alleles in FlyBase: Vocabularies
- Finding related genes in FlyBase: The Gene Ontology
- Gene Snapshots in FlyBase
- Finding genes with similar phenotypes
Tools series
- RNA-Seq Part I: Using GBrowse
- RNA-Seq Part II: Using RNA-Seq Profile Search
- RNA Seq Part III: Searching for Similarly Expressed Genes
- Finding related genes/alleles in FlyBase: Vocabularies
- Using the Orthology search tool
- Finding related genes in FlyBase: The Gene Ontology
- Finding genes with similar phenotypes
RNA-Seq series
- RNA-Seq Part I: Using GBrowse
- RNA-Seq Part II: Using RNA-Seq Profile Search
- RNA Seq Part III: Searching for Similarly Expressed Genes
FlyBase Guidelines
Report Help
Field by Field guides to FlyBase Reports
- All Reports
- Aberration Report
- Allele Report
- Balancer/Genotype variant Report
- Cell Line Report
- Clone Report
- CV (Controlled Vocabulary) Term Report
- Dataset/Collection Report
- Experimental Tool Report
- Gene Report
- Gene Group Report
- Human Disease Model Report
- Image Report
- Insertion Report
- Interaction Report
- Natural Transposon Report
- Pathway Report
- Person Report
- Polypeptide Report
- Recombinant Construct Report
- Reference Report
- Sequence Feature Report
- Strain Report
- Stock Report
- Transcript Report
Curation Documentation
- Controlled Vocabularies used by FlyBase
- Gene Model Annotation Guidelines
- Gene Ontology (GO) Annotation
- Nontraditional alleles
- Comonly used Vectors and Constructs
Tools and Downloads Documentation
Tools Overview
Query Tools Help
Genomic/Map Tools Help
- BLAST
- CytoSearch
- Feature Mapper
- FlyBase GBrowse Help
- GBrowse Tracks
- FlyBase JBrowse Help
- JBrowse Tracks
- Feature differences between JBrowse and GBrowse on FlyBase
- Complete list of GBrowse/JBrowse Data Track Differences
Retrieve/Convert Tools Help
RNA-Seq Tools Help
Downloads
Information for Authors
- Author Guidelines
- Citing FlyBase
- Fast Track Your Paper
- FlyBase Community
- Gene Snapshots
- Personal Communications to FlyBase