Difference between revisions of "FlyBase:Complete list of GBrowse/JBrowse Track Differences"
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|style="white-space: nowrap;"| RNA-Seq Treatments/Conditions | |style="white-space: nowrap;"| RNA-Seq Treatments/Conditions | ||
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− | |style="white-space: nowrap;"| RNA-Seq by Tissue (digestive system, fat body/salivary, imaginal disc/ | + | |style="white-space: nowrap;"| RNA-Seq by Tissue (digestive system, fat body/salivary, imaginal disc/carcass, CNS, gonads, L3 CNS) |
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|style="white-space: nowrap;"| Small RNA-Seq (tissues, developmental stages, cell lines) | |style="white-space: nowrap;"| Small RNA-Seq (tissues, developmental stages, cell lines) |
Revision as of 16:28, 16 May 2018
Complete list of Data Tracks present in GBrowse but not in JBrowse
Basic Tracks |
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CDS track |
Restriction Sites |
Transcription Start Sites |
RAMPAGE (stage specific) |
MachiBase |
Mapped Mutations |
Transgenic insertions in stocks (Bloomington, Kyoto, Harvard Medical School) |
Gene Predictions |
Gene Predictions (NCBI Gnomon, CONTRAST, PhyloCSF) |
Protein Similarity |
Similarity to Dmel proteins |
Similarity to Other proteins |
Noncoding Features |
TFBS - mesoderm |
Chromatin Domains |
Histone Modifications |
Microarray Features |
Affymetrix |
DGRC amplicons |
RNA-Seq |
RNA-Seq Cell lines |
RNA-Seq Treatments/Conditions |
RNA-Seq by Tissue (digestive system, fat body/salivary, imaginal disc/carcass, CNS, gonads, L3 CNS) |
Small RNA-Seq (tissues, developmental stages, cell lines) |
Track identities available in color-coded table |
Configure RNA-Seq view (log2 or linear scaling, tilted or vertical tracks, track spacing, track selection) |
Aberrations |
Stock Center Aberrations |
Bloomington Deficiency Kit |
Other Reagents |
BAC clones (Tiling, Pacman) |
VDRC Vienna Tiles GAL4 lines |