FlyBase:Sequence Feature Report
Last Updated: 24 June 2015
The Sequence Feature Report contains the information for an individual sequence feature.
This is a field-by-field guide to the information provided in the Sequence Feature Report.
FlyBase attributes data to the publication that reported it, so that users can easily refer back to the original publication if they wish. Thus, where possible in the fields below, the publication(s) that are the source of the information are listed, typically in parentheses to the right of the data.
General Information
| Symbol | The valid symbol that is used in FlyBase. |
| Species | The organism that the cell line originates from, with the initial letter of the genus and the full species name listed. |
| Feature Type | The type of feature described in the report. |
| FlyBase ID | The Primary FlyBase identifier number of the sequence feature, used to uniquely identify the sequence feature in the database.
A sequence feature may also have any number of Secondary FlyBase identifier numbers, which are listed in the Secondary FlyBase IDs section of the Sequence feature Report. |
| Collection | ?? |
| Associated gene(s) | ?? |
Genomic Location
| Chromosome Arm | The chromosome arm that the sequence is located on. |
| Sequence location | The extent of the sequence feature on the genome, prefixed with the chromosome arm that the gene is located on. The strand to which the sequence feature maps is indicated in square brackets after the sequence coordinates. |
| Map | A GBrowse thumbnail showing the location of the gene (highlighted in yellow) in the genome. |
Sequence Data
| Length | ?? |
| Comments | ?? |
| Sequence | ?? |
Associated Information
| Gene(s) | ?? |
| (targeted or local) | ?? |
| Allele(s) | ?? |
| Transcripts(s) | ?? |
| Polypeptide(s) | ?? |
| Construct | ?? |
Experimental Data
Progenitors
| PCR template | ?? |
| Primer 1 | ?? |
| Primer 2 | ?? |
| Comments | ?? |
Collection Information
For each collection:
| Symbol | ?? |
Source and Progenitors
| Species of derivation | ?? |
Strain of derivation
| Vector or progenitor construct | ?? |
Description
??
Additional data
??
Cell lines
| Observed in | ?? |
| Not observed in | ?? |
Comments
Miscellaneous free text comments about the sequence feature.
Stocks Listed in FlyBase
A list of the stocks from the public Stock Centers that contain this sequence feature; for each Stock Center, stock number and genotype are displayed. Clicking on the genotype will take you to the appropriate Stock Report.
External Crossreferences and Linkouts
Synonyms and Secondary IDs
Reported As
| Symbol Synonym | A list of symbols that have been used in the literature, or by FlyBase, to describe the sequence feature. |
Secondary FlyBase IDs
A list of Secondary FlyBase identifier numbers of the sequence feature.
References
A list of publications that discuss the sequence feature, subdivided into fields by type of publication. Only fields containing data are displayed in an individual Sequence Feature Report.