Difference between revisions of "FlyBase:Stocks"
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ChrisTabone (talk | contribs) (Created page with "= List of D. melanogaster Stock Collections = {|cellpadding=5 |- !style="background: #efefef;"| Resource !!style="background: #efefef;"| Description !!style="background: #efe...") |
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− | = | + | = List of D. melanogaster Stock Collections = |
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− | + | |style="background: #efefef;"| [http://flystocks.bio.indiana.edu/ BDSC, Bloomington Drosophila Stock Center] ||style="background: #efefef;"| A diverse collection of stocks useful for a wide range of research applications. ||style="background: #efefef;"| BDSC, Indiana University, Bloomington, IN, USA | |
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− | + | | [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi DGGR, Kyoto Stock Center] || The Department of Drosophila Genomics and Genetics Resources collects, maintains and distributes Drosophila melanogaster strains for research. || DGGR, Kyoto, Japan | |
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− | |style=" | + | |style="background: #efefef;"| [https://drosophila.med.harvard.edu/ Exelixis] ||style="background: #efefef;"| The Exelixis Collection at Harvard Medical School||style="background: #efefef;"| Harvard Medical School, Boston, MA, USA |
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− | + | | [http://flyorf.ch/ FlyORF] || Well characterized transgenic UAS-ORF lines. Approximately 2,400 fly stocks comprising about 1900 genes, generated using the phiC31 integrase method || FlyORF, University of Zurich, Zurich, Switzerland | |
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− | |style=" | + | |style="background: #efefef;"| [http://www.shigen.nig.ac.jp/fly/nigfly/ NIG-FLY] ||style="background: #efefef;"| NIG-RNAi stocks and TRiP Stocks for RNA interference experiments ||style="background: #efefef;"| NIG-FLY, National Institute of Genetics, Mishima, Japan |
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− | |style=" | + | |style="white-space: nowrap;"| [http://flystocks.bio.indiana.edu/Browse/misc-browse/CRISPR.htm CRISPR system stocks for site-specific mutagenesis]||style=" white-space: nowrap;"| CRISPR system stocks for site-specific mutagenesis at BDSC || BDSC, Indiana University, Bloomington, IN, USA |
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− | | style=" | + | |style="background: #efefef;"| [http://center.biomed.tsinghua.edu.cn/public/eq-category/modelanimalfacility/ Tsinghua Fly Center (THFC)] ||style="background: #efefef;"| Transgenic RNAi fly lines ||style="background: #efefef;"| THFC, Tsinghua University, Beijing, China |
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− | + | | [http://stockcenter.vdrc.at/control/main VDRC, Vienna Drosophila RNAi Center] || Trangenic Drosophila RNAi libraries, a collection of enhancer-GAL4 driver lines, the Tagged FlyFos TransgeneOme (fTRG) library || VDRC, Vienna, Austria | |
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− | = | + | = D. melanogaster Stock Collections by Specific Category = |
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|style="background: #efefef; white-space: nowrap;"| Human Disease Models ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/HD/HDintro.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/disease_ontology.html Kyoto] | |style="background: #efefef; white-space: nowrap;"| Human Disease Models ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/HD/HDintro.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/disease_ontology.html Kyoto] | ||
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− | |Deficiencies || | + | |Deficiencies || [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto] |
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− | | | + | |style="background: #efefef;"|Insertions ||style="background: #efefef;"| [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto], [https://drosophila.med.harvard.edu/ Harvard], [http://flypush.imgen.bcm.tmc.edu/pscreen/ GDP] |
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− | + | |RNAi || [http://flystocks.bio.indiana.edu/Browse/RNAi/RNAihome.htm BDSC], [http://www.shigen.nig.ac.jp/fly/nigfly/ NIG-FLY], [http://stockcenter.vdrc.at/control/rnailibrary VDRC], [http://www.med.tsinghua.edu.cn/index.php/en/administration/medical-school-notice/822-20150520 THFC] | |
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− | |GAL4 || [http://flystocks.bio.indiana.edu/Browse/gal4/gal4_main.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/GAL4.html Kyoto], [http://stockcenter.vdrc.at/control/vtlibrary VDRC], | + | |style="background: #efefef;"|GAL4 ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/gal4/gal4_main.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/GAL4.html Kyoto], [http://stockcenter.vdrc.at/control/vtlibrary VDRC], |
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− | + | |UAS || [http://flystocks.bio.indiana.edu/Browse/uas/uashome.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/UAS.html Kyoto], [http://flyorf.ch/ FlyOrf] | |
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− | |Fluor || [http://flystocks.bio.indiana.edu/Browse/GFP/GFPhome.htm BDSC], [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto] | + | |style="background: #efefef;"|Fluor ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/GFP/GFPhome.htm BDSC], [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto] |
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− | + | |Tagged proteins under native control || [http://flystocks.bio.indiana.edu/Browse/GFP/GFPhome.htm BDSC], [https://kyotofly.kit.jp/cgi-bin/stocks/index.cgi Kyoto], [http://stockcenter.vdrc.at/control/about_ftrg VDRC] | |
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− | |CRISPR || [http://flystocks.bio.indiana.edu/Browse/misc-browse/CRISPR.htm BDSC], [http://www.shigen.nig.ac.jp/fly/nigfly/cas9ListAction.do NIG-FLY] | + | |style="background: #efefef;"|CRISPR ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/misc-browse/CRISPR.htm BDSC], [http://www.shigen.nig.ac.jp/fly/nigfly/cas9ListAction.do NIG-FLY] |
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− | + | |phiC31 ||[http://flystocks.bio.indiana.edu/Browse/phiC31/phiC31home.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/phiC31.html Kyoto] | |
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− | |FRT || [http://flystocks.bio.indiana.edu/Browse/misc-browse/frt.php BDSC], [http://kyotofly.kit.jp/stocks/documents/FRT.html Kyoto] | + | |style="background: #efefef;"|FRT ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/misc-browse/frt.php BDSC], [http://kyotofly.kit.jp/stocks/documents/FRT.html Kyoto] |
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− | + | |Balancers || [http://flystocks.bio.indiana.edu/Browse/balancers/balancer_main.htm BDSC], [http://kyotofly.kit.jp/stocks/documents/Balancers.html Kyoto] | |
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− | |Sequenced strains || [http://flystocks.bio.indiana.edu/Browse/sequenced.htm BDSC] | + | |style="background: #efefef;"|Sequenced strains ||style="background: #efefef;"| [http://flystocks.bio.indiana.edu/Browse/sequenced.htm BDSC] |
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− | + | |Wildtype stocks || [http://flystocks.bio.indiana.edu/Browse/misc-browse/wildtype.php BDSC], [http://kyotofly.kit.jp/stocks/documents/Wild_type_stocks.html Kyoto] | |
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− | |Non-<em>melanogaster</em> <em>Drosophila</em> species || [http://kyotofly.kit.jp/stocks/documents/Other_species.html Kyoto], [https://stockcenter.ucsd.edu/index.php?table=Species&sort=location+desc DSSC] | + | |style="background: #efefef;"|Non-<em>melanogaster</em> <em>Drosophila</em> species ||style="background: #efefef;"| [http://kyotofly.kit.jp/stocks/documents/Other_species.html Kyoto], [https://stockcenter.ucsd.edu/index.php?table=Species&sort=location+desc DSSC] |
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− | = | + | = D. melanogaster Stock Collection Informational Sites = |
− | {|cellpadding= | + | {|cellpadding=5 |
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!style="background: #efefef;"| Resource !!style="background: #efefef;"| Description !!style="background: #efefef;"| Author/Source | !style="background: #efefef;"| Resource !!style="background: #efefef;"| Description !!style="background: #efefef;"| Author/Source | ||
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− | |style="background: #efefef;"| [http://www.crisprflydesign.org/flies/ CRISPR fly design] ||style="background: #efefef;"| Details of a set of | + | |style="background: #efefef;"| [http://www.crisprflydesign.org/flies/ CRISPR fly design] ||style="background: #efefef;"| Details of a set of cas9 transgenic D. melanogaster lines which are available at the BDSC ||style="background: #efefef;"| MRC-Laboratory of Molecular Biology, Cambridge, UK |
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− | + | | [http://www.drosdel.org.uk/ DrosDel An isogenic deficiency kit for Drosophila melanogaster]|| Information about isogenic deficiency lines generated by the DrosDel Project || University of Cambridge, Cambridge, UK | |
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− | | [http://cooley.medicine.yale.edu/flytrap/ Flytrap Project] || Information about GFP protein trap lines from the FlyTrap project | + | |style="background: #efefef;"| [http://cooley.medicine.yale.edu/flytrap/ Flytrap Project] ||style="background: #efefef;"| Information about GFP protein trap lines from the FlyTrap project ||style="background: #efefef;"| Yale University, New Haven, CT, USA |
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− | + | | [http://flypush.imgen.bcm.tmc.edu/pscreen/ Gene Disruption Project] || Information about insertion lines produced by the Gene Disruption Project (GDP) || Baylor College of Medicine, Houston, TX, USA | |
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− | | [http://flypush.imgen.bcm.tmc.edu/pscreen/rmce/ | + | |style="background: #efefef;"| [http://flypush.imgen.bcm.tmc.edu/pscreen/rmce/ Gene Disruption Project] ||style="background: #efefef;"| Information about MiMIC RMCE Lines ||style="background: #efefef;"| Baylor College of Medicine, Houston, TX, USA |
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− | + | | [http://www.ehime-u.ac.jp/~scibio/evolut/DSEU_photo/ Ehime University fly species photographs] || Photograph of 102 species of Drosophila in Drosophila stocks of Ehime University. || Ehime University, Matsuyama, Ehime, Japan | |
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− | | [http://www.ehime-u.ac.jp/~scibio/evolut/DSEU_photo/ Ehime University fly species photographs] || | ||
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− | = | + | = List of Drosophila Species Collections = |
− | {|cellpadding= | + | {|cellpadding=5 |
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!style="background: #efefef;"| Resource !!style="background: #efefef;"| Description !!style="background: #efefef;"| Author/Source | !style="background: #efefef;"| Resource !!style="background: #efefef;"| Description !!style="background: #efefef;"| Author/Source | ||
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− | |style="background: #efefef; white-space: nowrap;"| [https://kyotofly.kit.ac.jp/cgi-bin/ehime/index.cgi EHIME-Fly]||style="background: #efefef;"| Wild type stocks of | + | |style="background: #efefef; white-space: nowrap;"| [https://kyotofly.kit.ac.jp/cgi-bin/ehime/index.cgi EHIME-Fly]||style="background: #efefef;"| Wild type stocks of Drosophila species that have been recorded in Japan. EHIME-Fly maintains and distributes over 130 species, represented by approximately 1450 stocks. ||style="background: #efefef; white-space: nowrap;"| Ehime University<br/> Matsuyama, Ehime Prefecture, Japan |
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− | | [https://stockcenter.ucsd.edu/info/welcome.php DSSC, Drosophila Species Stock Center] || The DSSC maintains a living collection of over 250 | + | | [https://stockcenter.ucsd.edu/info/welcome.php DSSC, Drosophila Species Stock Center] || The DSSC maintains a living collection of over 250 Drosophila species represented by approximately 1600 stocks || University of California San Diego<br/> San Diego, CA, USA |
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− | |style="background: #efefef; white-space: nowrap;"| [http://www.shigen.nig.ac.jp/fly/kyorin/cgi-bin/index.cgi KYORIN-Fly ] ||style="background: #efefef;"| Mutant and wild type stocks of | + | |style="background: #efefef; white-space: nowrap;"| [http://www.shigen.nig.ac.jp/fly/kyorin/cgi-bin/index.cgi KYORIN-Fly ] ||style="background: #efefef;"| Mutant and wild type stocks of Drosophila species, especially the Drosophila ananassae species subgroup, D. auraria complex, and D. hydei. ||style="background: #efefef;"| Kyorin University<br/> Shinkawa, Mitaka, Tokyo, Japan |
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− | [[#top|Back to top.]] | [[ | + | [[#top|Back to top.]] | [[External_Resources#top|Back to External Resources Page.]] | [http://flybase.org/cgi-bin/mailto-fbhelp.html Provide Feedback.] |
Revision as of 19:09, 16 December 2015
List of D. melanogaster Stock Collections
Resource | Description | Author/Source |
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BDSC, Bloomington Drosophila Stock Center | A diverse collection of stocks useful for a wide range of research applications. | BDSC, Indiana University, Bloomington, IN, USA |
DGGR, Kyoto Stock Center | The Department of Drosophila Genomics and Genetics Resources collects, maintains and distributes Drosophila melanogaster strains for research. | DGGR, Kyoto, Japan |
Exelixis | The Exelixis Collection at Harvard Medical School | Harvard Medical School, Boston, MA, USA |
FlyORF | Well characterized transgenic UAS-ORF lines. Approximately 2,400 fly stocks comprising about 1900 genes, generated using the phiC31 integrase method | FlyORF, University of Zurich, Zurich, Switzerland |
NIG-FLY | NIG-RNAi stocks and TRiP Stocks for RNA interference experiments | NIG-FLY, National Institute of Genetics, Mishima, Japan |
CRISPR system stocks for site-specific mutagenesis | CRISPR system stocks for site-specific mutagenesis at BDSC | BDSC, Indiana University, Bloomington, IN, USA |
Tsinghua Fly Center (THFC) | Transgenic RNAi fly lines | THFC, Tsinghua University, Beijing, China |
VDRC, Vienna Drosophila RNAi Center | Trangenic Drosophila RNAi libraries, a collection of enhancer-GAL4 driver lines, the Tagged FlyFos TransgeneOme (fTRG) library | VDRC, Vienna, Austria |
D. melanogaster Stock Collections by Specific Category
Stock Category | Availability |
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Human Disease Models | BDSC, Kyoto |
Deficiencies | Kyoto |
Insertions | Kyoto, Harvard, GDP |
RNAi | BDSC, NIG-FLY, VDRC, THFC |
GAL4 | BDSC, Kyoto, VDRC, |
UAS | BDSC, Kyoto, FlyOrf |
Fluor | BDSC, Kyoto |
Tagged proteins under native control | BDSC, Kyoto, VDRC |
CRISPR | BDSC, NIG-FLY |
phiC31 | BDSC, Kyoto |
FRT | BDSC, Kyoto |
Balancers | BDSC, Kyoto |
Sequenced strains | BDSC |
Wildtype stocks | BDSC, Kyoto |
Non-melanogaster Drosophila species | Kyoto, DSSC |
D. melanogaster Stock Collection Informational Sites
Resource | Description | Author/Source |
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CRISPR fly design | Details of a set of cas9 transgenic D. melanogaster lines which are available at the BDSC | MRC-Laboratory of Molecular Biology, Cambridge, UK |
DrosDel An isogenic deficiency kit for Drosophila melanogaster | Information about isogenic deficiency lines generated by the DrosDel Project | University of Cambridge, Cambridge, UK |
Flytrap Project | Information about GFP protein trap lines from the FlyTrap project | Yale University, New Haven, CT, USA |
Gene Disruption Project | Information about insertion lines produced by the Gene Disruption Project (GDP) | Baylor College of Medicine, Houston, TX, USA |
Gene Disruption Project | Information about MiMIC RMCE Lines | Baylor College of Medicine, Houston, TX, USA |
Ehime University fly species photographs | Photograph of 102 species of Drosophila in Drosophila stocks of Ehime University. | Ehime University, Matsuyama, Ehime, Japan |
List of Drosophila Species Collections
Resource | Description | Author/Source |
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EHIME-Fly | Wild type stocks of Drosophila species that have been recorded in Japan. EHIME-Fly maintains and distributes over 130 species, represented by approximately 1450 stocks. | Ehime University Matsuyama, Ehime Prefecture, Japan |
DSSC, Drosophila Species Stock Center | The DSSC maintains a living collection of over 250 Drosophila species represented by approximately 1600 stocks | University of California San Diego San Diego, CA, USA |
KYORIN-Fly | Mutant and wild type stocks of Drosophila species, especially the Drosophila ananassae species subgroup, D. auraria complex, and D. hydei. | Kyorin University Shinkawa, Mitaka, Tokyo, Japan |
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