Difference between revisions of "FlyBase:Model Organism Databases"

From FlyBase Wiki
Jump to navigation Jump to search
 
(17 intermediate revisions by 5 users not shown)
Line 1: Line 1:
 +
= Popular Resource Categories =
 +
 +
{|class="wikitable"
 +
|-
 +
|style="text-align: center; padding: 15px;"| <big>[[FlyBase:External_Resources|All Resources]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:CRISPR|CRISPR]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:ScRNA-Seq|ScRNA-Seq]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:RNAi|RNAi]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Stocks|Stocks]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase: Antibodies|Antibodies]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Neuroscience|Neuroscience]]</big>
 +
|-
 +
{|class="wikitable"
 +
|-
 +
|style="text-align: center; padding: 15px;"| <big>[[FlyBase:Model_Organism_Databases|Model Organism<br/> Databases]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Images|Images]]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Maps|Maps]]</big> ||style="text-align: center; padding: 20px;"| <big>[http://www.flyrnai.org/tools/protocols/web/ Protocols]</big> ||style="text-align: center; padding: 20px;"| <big>[[FlyBase:Papers_with_technical_advances|Papers with<br/> Technical Advances]]</big>||style="text-align: center; padding: 20px;"| <big>[[FlyBase:GSEA|Gene Set<br/> Enrichment Analysis]]</big>
 +
 +
|}
 +
 +
 +
__TOC__
 +
 
=Model Organisms=
 
=Model Organisms=
 
{| class="wikitable" border="1"
 
{| class="wikitable" border="1"
Line 5: Line 20:
 
! Organism  
 
! Organism  
 
! Organism (Genus and species)
 
! Organism (Genus and species)
 +
|-
 +
| [http://www.alliancegenome.org/ Alliance of Genome Resources]
 +
| Rat, Mouse, Zebrafish, Fly, Worm, Budding yeast, Gene Ontology (GO)
 +
|
 +
|-
 +
| [http://www.gmod.org/wiki/Main_Page GMOD]
 +
| Generic Model Organism Database project
 +
|
 
|-
 
|-
 
| [http://hymenopteragenome.org/beebase/ BeeBase]  
 
| [http://hymenopteragenome.org/beebase/ BeeBase]  
 
| Honey Bee
 
| Honey Bee
 
| Apis mellifera
 
| Apis mellifera
−
|-
 
−
| [http://beetlebase.org/ BeetleBase]
 
−
| Red Flour Beetle
 
−
| Tribolium castaneum
 
 
|-
 
|-
 
| [http://dictybase.org/ DictyBase]
 
| [http://dictybase.org/ DictyBase]
Line 30: Line 49:
 
| Mus musculus
 
| Mus musculus
 
|-
 
|-
−
| [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=OMIM/ OMIM]
+
| [http://omim.org/ OMIM]
 
| Human
 
| Human
 
| Homo sapiens
 
| Homo sapiens
 +
|-
 +
| [http://www.pombase.org// PomBase]
 +
| Fission Yeast
 +
| Schizosaccharomyces pombe
 +
|-
 +
| [http://pseudobase.biology.duke.edu/ Pseudobase]
 +
| Drosophila pseudoobscura
 +
| Drosophila pseudoobscura
 +
|-
 +
| [http://rgd.mcw.edu/ RGD]
 +
| Rat
 +
| Rattus norvegicus
 
|-
 
|-
 
| [http://www.yeastgenome.org// SGD]
 
| [http://www.yeastgenome.org// SGD]
 
| Budding Yeast
 
| Budding Yeast
 
| Saccharomyces cerevisiae
 
| Saccharomyces cerevisiae
−
|-
 
−
| [http://www.genedb.org/genedb/pombe/index.jsp S. pombe GeneDB]
 
−
| Fission Yeast
 
−
| Schizosaccharomyces pombe
 
 
|-
 
|-
 
| [http://www.arabidopsis.org/ TAIR]
 
| [http://www.arabidopsis.org/ TAIR]
 
| Mouse-ear cress
 
| Mouse-ear cress
 
| Arabidopsis thaliana
 
| Arabidopsis thaliana
 +
|-
 +
| [https://i5k.nal.usda.gov/tribolium-castaneum Tribolium castaneum i5k Workspace@NAL]
 +
| Red Flour Beetle
 +
| Tribolium castaneum
 
|-
 
|-
 
| [http://www.vectorbase.org/index.php VectorBase]
 
| [http://www.vectorbase.org/index.php VectorBase]
Line 52: Line 83:
 
| [http://www.wormbase.org/ WormBase]
 
| [http://www.wormbase.org/ WormBase]
 
| Round worms
 
| Round worms
−
| Caenorhabditis
+
| Caenorhabditis elegans
 +
|-
 +
| [http://www.xenbase.org/ Xenbase]
 +
| Frogs
 +
| Xenopus laevis, Xenopus tropicalis
 
|-
 
|-
−
| [http://zfin.org/cgi-bin/webdriver?MIval=aa-ZDB_home.apg ZFIN]
+
| [http://zfin.org ZFIN]
 
| Zebrafish
 
| Zebrafish
 
| Danio rerio
 
| Danio rerio
 
|}
 
|}
 
[[Category:DONE]]
 
[[Category:DONE]]

Latest revision as of 14:30, 20 September 2023

Popular Resource Categories

All Resources CRISPR ScRNA-Seq RNAi Stocks Antibodies Neuroscience
Model Organism
Databases		 Images Maps Protocols Papers with
Technical Advances		 Gene Set
Enrichment Analysis


Model Organisms

Database Organism Organism (Genus and species)
Alliance of Genome Resources Rat, Mouse, Zebrafish, Fly, Worm, Budding yeast, Gene Ontology (GO)
GMOD Generic Model Organism Database project
BeeBase Honey Bee Apis mellifera
DictyBase Soil Amoeba Dictyostelium discoideum
EcoCyc Bacteria Escherichia coli
Gramene Grasses
MGI Mouse Mus musculus
OMIM Human Homo sapiens
PomBase Fission Yeast Schizosaccharomyces pombe
Pseudobase Drosophila pseudoobscura Drosophila pseudoobscura
RGD Rat Rattus norvegicus
SGD Budding Yeast Saccharomyces cerevisiae
TAIR Mouse-ear cress Arabidopsis thaliana
Tribolium castaneum i5k Workspace@NAL Red Flour Beetle Tribolium castaneum
VectorBase Mosquitos and Deer Tick Anopheles gambiae, Aedes aegypti, Culex pipiens quinquefasciatus, Ixodes scapularis
WormBase Round worms Caenorhabditis elegans
Xenbase Frogs Xenopus laevis, Xenopus tropicalis
ZFIN Zebrafish Danio rerio
Retrieved from "https://wiki.flybase.org/mediawiki/index.php?title=FlyBase:Model_Organism_Databases&oldid=172447"